Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   FH104_RS08940 Genome accession   NZ_CP090014
Coordinates   1803304..1804338 (+) Length   344 a.a.
NCBI ID   WP_017175228.1    Uniprot ID   A0A4V2KX37
Organism   Staphylococcus hominis strain acrlk     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1798304..1809338
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FH104_RS08910 (FH104_08890) - 1798841..1799560 (+) 720 WP_017175233.1 type 1 glutamine amidotransferase -
  FH104_RS08915 (FH104_08895) - 1799605..1800594 (-) 990 WP_070813217.1 FUSC family protein -
  FH104_RS08920 (FH104_08900) map 1800768..1801520 (+) 753 WP_049382583.1 type I methionyl aminopeptidase -
  FH104_RS08925 (FH104_08905) - 1801775..1801867 (-) 93 Protein_1743 hypothetical protein -
  FH104_RS08930 (FH104_08910) - 1802198..1802584 (+) 387 WP_070813218.1 hypothetical protein -
  FH104_RS08935 (FH104_08915) liaF 1802606..1803307 (+) 702 WP_017175229.1 cell wall-active antibiotics response protein LiaF -
  FH104_RS08940 (FH104_08920) vraS 1803304..1804338 (+) 1035 WP_017175228.1 sensor histidine kinase Regulator
  FH104_RS08945 (FH104_08925) vraR 1804340..1804969 (+) 630 WP_002450048.1 two-component system response regulator VraR Regulator
  FH104_RS08950 (FH104_08930) - 1805048..1806250 (-) 1203 WP_061815718.1 YihY/virulence factor BrkB family protein -
  FH104_RS08955 (FH104_08935) - 1806342..1806623 (-) 282 WP_002450075.1 hypothetical protein -
  FH104_RS08960 (FH104_08940) - 1806629..1807093 (-) 465 WP_070813219.1 low molecular weight protein-tyrosine-phosphatase -
  FH104_RS08965 (FH104_08945) - 1807235..1807441 (+) 207 WP_002450082.1 DUF1128 domain-containing protein -
  FH104_RS08970 (FH104_08950) - 1807453..1808700 (+) 1248 WP_070813220.1 aminopeptidase -
  FH104_RS08975 (FH104_08955) - 1808733..1809266 (+) 534 WP_070813221.1 acyl-CoA thioesterase -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 39716.26 Da        Isoelectric Point: 5.8932

>NTDB_id=640217 FH104_RS08940 WP_017175228.1 1803304..1804338(+) (vraS) [Staphylococcus hominis strain acrlk]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSVLAYKINQQNDWIKN
QIEHAIEGETVGINDKNIELYNETIDIYQMLVPLNQELQRLRIKTQNLTNENYNMNDIKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETELEPPLNQQIPVLEKMIQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIYDI
QDFKVPKGIEDHLFRITQEAISNTLRHSDGTKVTVELFNHQDYLLLRIQDNGKGFNVDEKVEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLTKEEG

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=640217 FH104_RS08940 WP_017175228.1 1803304..1804338(+) (vraS) [Staphylococcus hominis strain acrlk]
ATGAATCACTATTTAAGAGCAATAGGATCCATGCTTATTTTAGTGTATAGCATGCTAACTGCGTTTTTATTTATAGATAA
AGTTTTTGTAAATATTATATATTTTCAAGGAATGTTCTATACTCAAATATTTGGTATACCTGTGTTTCTATTTCTTAATT
TAGTGATTATTTTACTTTGTATTATCGTTGGCTCTGTATTAGCTTATAAAATAAATCAGCAAAATGATTGGATAAAGAAT
CAAATTGAACACGCCATTGAAGGTGAAACGGTAGGGATTAATGATAAAAACATAGAACTATATAATGAAACAATTGATAT
TTATCAAATGTTAGTGCCTTTAAATCAAGAATTACAGCGATTAAGAATCAAAACTCAAAATTTAACAAATGAAAACTACA
ATATGAATGACATTAAAGTAAAAAAAATTATAGAAGATGAGCGTCAGCGTTTAGCAAGGGAATTACACGATTCAGTAAGT
CAACAACTTTTCGCAGCAAGTATGATGTTATCAGCGATAAAAGAAACAGAACTAGAACCACCCCTTAACCAACAAATTCC
AGTACTTGAGAAAATGATACAAGAATCTCAATTAGAGATGCGAGCGCTGTTACTACATTTGCGACCTTTAGGACTCAAGG
ATAAATCATTAGGGGAAGGTATTAAAGATTTAGTCATTGATTTACAAAAGAAAGTACCTATGAAAGTCATTTATGATATA
CAAGATTTTAAAGTGCCTAAAGGAATTGAAGATCATCTATTTCGCATTACACAAGAGGCAATTTCAAATACATTAAGACA
TTCTGATGGAACTAAAGTGACAGTCGAATTATTTAATCATCAAGATTATTTATTATTAAGAATTCAAGATAATGGTAAAG
GCTTTAACGTAGATGAAAAAGTAGAACAAAGTTATGGATTGAAAAATATGAGAGAACGTGCATTAGAAATAGGTGCAACG
TTTCATATCGTATCTCTACCAGATTCAGGAACTAGAATAGAGGTAAAAGCACCTTTAACGAAAGAGGAGGGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4V2KX37

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

89.826

100

0.898