Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   LV497_RS07990 Genome accession   NZ_CP090007
Coordinates   1730776..1731777 (+) Length   333 a.a.
NCBI ID   WP_014634136.1    Uniprot ID   A0A1V0H5P5
Organism   Streptococcus salivarius strain SALI-10     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1725776..1736777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LV497_RS07970 (LV497_07970) smpB 1726894..1727358 (+) 465 WP_002885905.1 SsrA-binding protein SmpB -
  LV497_RS07975 (LV497_07975) - 1727505..1728911 (+) 1407 WP_004182928.1 Cof-type HAD-IIB family hydrolase -
  LV497_RS07980 (LV497_07980) - 1728913..1729281 (+) 369 WP_002886108.1 S1 RNA-binding domain-containing protein -
  LV497_RS07985 (LV497_07985) - 1729381..1730463 (-) 1083 WP_002886210.1 Xaa-Pro peptidase family protein -
  LV497_RS07990 (LV497_07990) ccpA 1730776..1731777 (+) 1002 WP_014634136.1 catabolite control protein A Regulator
  LV497_RS07995 (LV497_07995) - 1731837..1732904 (+) 1068 WP_002886051.1 MmcQ/YjbR family DNA-binding protein -
  LV497_RS08000 (LV497_08000) - 1732917..1734032 (+) 1116 WP_048675117.1 glycerate kinase -
  LV497_RS08005 (LV497_08005) - 1734063..1734518 (-) 456 WP_048675120.1 YueI family protein -
  LV497_RS08010 (LV497_08010) eno 1734724..1736028 (+) 1305 WP_002886048.1 surface-displayed alpha-enolase -
  LV497_RS08015 (LV497_08015) - 1736181..1736366 (-) 186 WP_002886071.1 hypothetical protein -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36646.55 Da        Isoelectric Point: 5.4827

>NTDB_id=640149 LV497_RS07990 WP_014634136.1 1730776..1731777(+) (ccpA) [Streptococcus salivarius strain SALI-10]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFA
TLARGIDDIATMYKYNIVLASSDENDDHEVTVINSLFAKQVDGIIFMGYHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDSVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKAGLEKNNLRYNEGLVFEAKYSYKDGFDLAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPITSYTRPNLSSINHPLYDLGAVSMRMLTKIMNKEELEEKDV
ILNHGITLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=640149 LV497_RS07990 WP_014634136.1 1730776..1731777(+) (ccpA) [Streptococcus salivarius strain SALI-10]
ATGAATACTGATGAAACAATTACTATATACGACGTTGCGCGTGAAGCAGGTGTTTCGATGGCGACTGTGTCTCGTGTGGT
AAATGGAAATAAAAATGTAAAAGAAAACACCCGAAAAAAAGTACTCGAGGTCATTGATCGTTTGGATTACCGTCCAAATG
CGGTTGCGCGTGGCTTGGCGAGTAAGAAAACCACTACTGTAGGAGTTGTTATTCCAAATATTGCTAATAGTTATTTTGCT
ACTTTAGCAAGGGGGATTGATGATATTGCAACGATGTACAAGTACAATATTGTTCTTGCATCTAGTGATGAAAATGACGA
TCACGAAGTTACCGTGATTAACTCTCTATTTGCCAAACAAGTAGATGGTATCATCTTCATGGGTTACCACTTGACGGAAA
AAATTCGTGCAGAATTTTCTCGTACCCGTACTCCGATTGTCCTAGCAGGAACAGTGGACCTCGAGCACCAATTACCGAGT
GTTAACATCGACTATAAAGCTGCCGTTGAGGATTCTGTAACGCAACTTGCCAAGAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGATGATATTAATGGCAAGCTCCGTCTAGCTGGTTATAAGGCTGGACTTGAAAAGAATAATTTGCGTT
ACAATGAAGGTCTTGTCTTTGAAGCTAAATATAGCTATAAAGATGGCTTTGATTTAGCACAACGTGTTTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGAGAAGATGAATTGGCTGCAGGTCTCTTGAATGGCCTCTTTGCTGCAGGTAAATCAGTTCC
AGAAGACTTCGAAATCATCACAAGCAATGACTCACCAATTACAAGCTATACACGTCCAAACCTTTCTAGTATTAATCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATCATGAATAAGGAAGAACTTGAAGAAAAAGATGTT
ATTCTTAATCACGGTATTACCTTACGTCAGTCAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1V0H5P5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.477

100

0.775

  ccpA Streptococcus pneumoniae D39

75.976

100

0.76

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556