Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LV497_RS05960 Genome accession   NZ_CP090007
Coordinates   1309123..1310385 (+) Length   420 a.a.
NCBI ID   WP_014633828.1    Uniprot ID   -
Organism   Streptococcus salivarius strain SALI-10     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1304123..1315385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LV497_RS05935 (LV497_05935) - 1304508..1306085 (+) 1578 WP_048673953.1 ABC transporter ATP-binding protein -
  LV497_RS05940 (LV497_05940) - 1306241..1306957 (+) 717 WP_002883635.1 YebC/PmpR family DNA-binding transcriptional regulator -
  LV497_RS05945 (LV497_05945) - 1307083..1307421 (+) 339 WP_073687439.1 preprotein translocase subunit YajC -
  LV497_RS05950 (LV497_05950) - 1307550..1308299 (+) 750 WP_002886457.1 isoprenyl transferase -
  LV497_RS05955 (LV497_05955) - 1308312..1309106 (+) 795 WP_245084204.1 phosphatidate cytidylyltransferase -
  LV497_RS05960 (LV497_05960) eeP 1309123..1310385 (+) 1263 WP_014633828.1 RIP metalloprotease Regulator
  LV497_RS05965 (LV497_05965) - 1310456..1312318 (+) 1863 WP_126405083.1 proline--tRNA ligase -
  LV497_RS05970 (LV497_05970) - 1312800..1314740 (+) 1941 WP_038675218.1 ABC transporter substrate binding protein -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45838.19 Da        Isoelectric Point: 5.8010

>NTDB_id=640133 LV497_RS05960 WP_014633828.1 1309123..1310385(+) (eeP) [Streptococcus salivarius strain SALI-10]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTIGSDGKVRRINLSDRQIDQTALPMNVTAYDLEDKLTITGLVLDETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNRIQVADGGAAQVAGLKNGDAIEAINKDKVTDWDSLKE
ALTENTQKFSKGDSLSVTVKRSNGQEETISVKPQENQGSYFLGVSPALKTSLKDKIFGGFQMAWEGAFKILVALKGLITN
FSLNKLGGPVAMFQMSAQASENGLISILNLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AIMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=640133 LV497_RS05960 WP_014633828.1 1309123..1310385(+) (eeP) [Streptococcus salivarius strain SALI-10]
ATGAAAGCTATTATTACCTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGTCATTTCTTTTTTGCTAA
ACGCTCAGGAATTTTGGTTCGTGAATTTGCCATTGGTATGGGACCGAAAATTTTTGCACACACTGGTAAGGATGGTACCG
TTTATACTATTCGCATCCTCCCTTTGGGTGGTTATGTCCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACA
GGTAGCCCTGCCAGTCTAACGATTGGATCAGATGGTAAGGTAAGACGTATCAACCTTTCGGATCGCCAGATTGATCAGAC
GGCTTTACCTATGAACGTCACTGCCTATGATTTGGAGGATAAGTTAACCATTACAGGTCTAGTCCTAGATGAGACCAAGA
CCTATGAGGTTGATCATGATGCCACTATCGTTGAGGAGGATGGTACAGAACTTCGTATCGCTCCTAAGGATGTCCAATAT
CAAAATGCAAGCATTTGGGGACGTTTAATTACCAACTTTGCTGGTCCTATGAATAACTTTATTCTTGGGGTGCTTGTCTT
TATTATCTTAGCCTTTGTTCAAGGTGGTGTTCAAGATACATCGACCAACCGTATCCAGGTAGCCGATGGAGGCGCTGCTC
AGGTGGCAGGCTTGAAAAATGGTGATGCCATCGAGGCTATCAATAAGGACAAGGTTACTGATTGGGACAGCTTGAAGGAA
GCATTGACAGAGAATACCCAAAAATTCTCCAAAGGTGATAGCCTTTCTGTGACAGTTAAGAGAAGTAACGGTCAGGAAGA
AACAATCTCTGTTAAACCTCAGGAGAACCAAGGTAGCTACTTTTTGGGTGTTTCTCCTGCTTTAAAAACAAGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGGGCCTTCAAAATTCTCGTAGCACTTAAGGGGCTTATCACCAAC
TTTAGTTTGAATAAACTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCCCAGGCTTCAGAAAATGGCTTGATTTCCAT
TCTTAACCTTATGGGGATGCTCTCAATTAACTTGGGAATTTTCAATCTTATCCCAATTCCAGCCCTTGACGGTGGAAAAA
TTGTTATGAATATTATTGAAGCCATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATTACACTTGCAGGTGTT
GCTATCATGGTTGTTCTTATGATTGCAGTCACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(205-272)

(6-406)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

95.238

100

0.952

  eeP Streptococcus thermophilus LMG 18311

95

100

0.95