Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   LV497_RS02975 Genome accession   NZ_CP090007
Coordinates   735809..736846 (-) Length   345 a.a.
NCBI ID   WP_022496186.1    Uniprot ID   -
Organism   Streptococcus salivarius strain SALI-10     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 730809..741846
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LV497_RS02950 (LV497_02950) ilvD 731080..732783 (-) 1704 WP_002884316.1 dihydroxy-acid dehydratase -
  LV497_RS02955 (LV497_02955) - 732911..734092 (+) 1182 WP_004183260.1 NAD(P)/FAD-dependent oxidoreductase -
  LV497_RS02965 (LV497_02965) trmB 734309..734950 (-) 642 WP_070476118.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  LV497_RS02970 (LV497_02970) ccrZ 734960..735751 (-) 792 WP_002884270.1 cell cycle regulator CcrZ -
  LV497_RS02975 (LV497_02975) pptB 735809..736846 (-) 1038 WP_022496186.1 ABC transporter permease Regulator
  LV497_RS02980 (LV497_02980) pptA 736843..737574 (-) 732 WP_022496187.1 ABC transporter ATP-binding protein Regulator
  LV497_RS02985 (LV497_02985) - 737639..738058 (+) 420 WP_002891660.1 HIT family protein -
  LV497_RS02990 (LV497_02990) - 738055..738354 (+) 300 WP_022496188.1 hypothetical protein -
  LV497_RS02995 (LV497_02995) - 738371..738721 (-) 351 WP_183139907.1 ribonuclease -
  LV497_RS03000 (LV497_03000) - 738759..739103 (-) 345 WP_155123768.1 hypothetical protein -
  LV497_RS03005 (LV497_03005) - 739122..739619 (-) 498 WP_245085241.1 hypothetical protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 40159.68 Da        Isoelectric Point: 10.5650

>NTDB_id=640105 LV497_RS02975 WP_022496186.1 735809..736846(-) (pptB) [Streptococcus salivarius strain SALI-10]
MIAKLFKERSKRFNARCAKYSRYVFNDHFILVLLFLLGFVLVQYSQLLRHFPKNPWAIILGLLVLCLLLPFWGNIATYLE
PADKHYLLVKEEEVLDHVKKATGRAFRFWVIVQSLIFILVIPLFLALGLPVWGVILVAVAMAILKYFIFQKKSQPYYKQS
GLNWTEAIAAENKRQQSILKFFSLFTNVKGITSSVKRRAYLDAILKRTKKDKEHTWYNLYLRAFLRSGDYFALSLRLFAL
TLLVIFLVPEKWLAMVLVVVFDYLLLFQLTALKSHFAYQRMANLMPVGKDMQVNNLKRLITQIVLVLTMVQAICLFDLKF
SLILVGMMLVLSLVYLPAKLKKMID

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=640105 LV497_RS02975 WP_022496186.1 735809..736846(-) (pptB) [Streptococcus salivarius strain SALI-10]
ATGATAGCTAAGCTATTTAAGGAGCGTAGCAAGCGATTCAATGCCCGCTGTGCTAAGTATAGTCGCTACGTTTTTAATGA
TCATTTTATCTTGGTTCTTCTCTTTCTGCTAGGCTTTGTCTTGGTTCAGTATAGCCAGTTGCTTCGACATTTTCCAAAAA
ATCCGTGGGCAATCATTCTTGGTTTGCTTGTGCTTTGTCTTCTATTGCCTTTCTGGGGGAATATTGCGACTTATCTAGAA
CCTGCGGACAAGCACTACCTTTTGGTTAAGGAAGAAGAGGTGCTAGACCATGTTAAGAAGGCAACGGGGCGTGCTTTTAG
ATTTTGGGTAATCGTACAAAGCCTGATTTTTATTTTGGTTATTCCCCTCTTTTTAGCCTTGGGGCTTCCAGTTTGGGGAG
TTATCCTTGTAGCTGTGGCTATGGCTATTCTTAAGTACTTTATTTTCCAGAAAAAGTCCCAACCTTATTATAAGCAGTCA
GGACTGAATTGGACTGAGGCTATTGCAGCGGAAAATAAGCGTCAACAATCGATTCTGAAGTTCTTTTCACTCTTTACCAA
TGTTAAGGGGATTACATCGAGTGTTAAACGCCGTGCTTATTTGGATGCTATTCTCAAACGTACAAAGAAAGACAAGGAAC
ATACCTGGTACAATCTTTACCTAAGAGCTTTCTTGCGTTCTGGAGATTACTTTGCCCTTAGTTTACGCCTGTTTGCCCTA
ACACTTCTAGTTATCTTTTTGGTTCCTGAAAAATGGTTGGCTATGGTGCTTGTGGTTGTTTTTGACTACCTCTTACTCTT
CCAGCTCACAGCACTTAAATCGCACTTTGCTTATCAGAGAATGGCTAACCTTATGCCGGTTGGAAAAGACATGCAGGTGA
ACAATCTTAAACGCTTGATTACACAGATTGTACTTGTACTGACTATGGTACAGGCTATTTGTCTCTTCGACCTTAAGTTT
AGTCTGATTTTGGTTGGAATGATGCTAGTTTTGAGCCTTGTTTACCTACCAGCCAAGCTTAAGAAGATGATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

96.512

99.71

0.962

  pptB Streptococcus thermophilus LMD-9

91.57

99.71

0.913