Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   LV497_RS02980 Genome accession   NZ_CP090007
Coordinates   736843..737574 (-) Length   243 a.a.
NCBI ID   WP_022496187.1    Uniprot ID   -
Organism   Streptococcus salivarius strain SALI-10     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 731843..742574
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LV497_RS02955 (LV497_02955) - 732911..734092 (+) 1182 WP_004183260.1 NAD(P)/FAD-dependent oxidoreductase -
  LV497_RS02965 (LV497_02965) trmB 734309..734950 (-) 642 WP_070476118.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  LV497_RS02970 (LV497_02970) ccrZ 734960..735751 (-) 792 WP_002884270.1 cell cycle regulator CcrZ -
  LV497_RS02975 (LV497_02975) pptB 735809..736846 (-) 1038 WP_022496186.1 ABC transporter permease Regulator
  LV497_RS02980 (LV497_02980) pptA 736843..737574 (-) 732 WP_022496187.1 ABC transporter ATP-binding protein Regulator
  LV497_RS02985 (LV497_02985) - 737639..738058 (+) 420 WP_002891660.1 HIT family protein -
  LV497_RS02990 (LV497_02990) - 738055..738354 (+) 300 WP_022496188.1 hypothetical protein -
  LV497_RS02995 (LV497_02995) - 738371..738721 (-) 351 WP_183139907.1 ribonuclease -
  LV497_RS03000 (LV497_03000) - 738759..739103 (-) 345 WP_155123768.1 hypothetical protein -
  LV497_RS03005 (LV497_03005) - 739122..739619 (-) 498 WP_245085241.1 hypothetical protein -
  LV497_RS03010 (LV497_03010) - 740013..742118 (-) 2106 WP_245085244.1 AAA family ATPase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26815.03 Da        Isoelectric Point: 4.4174

>NTDB_id=640106 LV497_RS02980 WP_022496187.1 736843..737574(-) (pptA) [Streptococcus salivarius strain SALI-10]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVGPSLFIVDEPF
LGLDPLAISDLIELLAEEKTNGKAILMSTHVLDSAEKMCDRFVILHHGQVLAQGTLEELRQTFGDDSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=640106 LV497_RS02980 WP_022496187.1 736843..737574(-) (pptA) [Streptococcus salivarius strain SALI-10]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTGACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCTT
ATGGGGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTCTATGAAGAGTTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGGCTTGATGTGAC
TGAGGGGATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAATTGGACTGGTTCCCGACTCAGTTTT
CAAAGGGAATGAAGCAGAAGGTTATGATTATCTGTGCCTTTATTGTTGGTCCAAGTCTTTTCATTGTTGATGAGCCCTTC
CTAGGCTTGGATCCCTTGGCGATTTCGGACTTGATTGAGCTTTTGGCTGAGGAAAAAACGAATGGTAAGGCGATTCTCAT
GTCGACTCACGTTTTGGATTCGGCTGAGAAAATGTGTGACCGTTTTGTGATTTTGCACCATGGACAGGTCTTGGCCCAGG
GGACTCTCGAGGAGCTCCGTCAGACTTTTGGCGACGATAGTGCTAGTCTTAACGATATCTACATGCAGTTAACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

98.354

100

0.984
  pptA Streptococcus thermophilus LMD-9

97.119

100

0.971