Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | P795_RS01620 | Genome accession | NC_023028 |
| Coordinates | 350019..350501 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046413.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii ZW85-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 345019..355501
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P795_RS01610 (P795_1570) | pilX | 345322..346140 (+) | 819 | WP_000149377.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| P795_RS01615 (P795_1575) | pilY1 | 346152..350006 (+) | 3855 | WP_023896142.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| P795_RS01620 (P795_1580) | pilY2 | 350019..350501 (+) | 483 | WP_001046413.1 | type IV pilin protein | Machinery gene |
| P795_RS01625 (P795_1585) | pilE | 350498..350923 (+) | 426 | WP_005130737.1 | type IV pilin protein | Machinery gene |
| P795_RS01630 (P795_1590) | rpsP | 351070..351321 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| P795_RS01635 (P795_1595) | rimM | 351341..351889 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| P795_RS01640 (P795_1600) | trmD | 351935..352675 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| P795_RS01645 (P795_1605) | rplS | 352883..353251 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| P795_RS01650 (P795_1610) | - | 353303..354244 (-) | 942 | WP_138149879.1 | triacylglycerol lipase | - |
| P795_RS01655 (P795_1615) | - | 354359..355393 (-) | 1035 | WP_043960320.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17602.87 Da Isoelectric Point: 8.8351
>NTDB_id=63958 P795_RS01620 WP_001046413.1 350019..350501(+) (pilY2) [Acinetobacter baumannii ZW85-1]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTRGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTRGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=63958 P795_RS01620 WP_001046413.1 350019..350501(+) (pilY2) [Acinetobacter baumannii ZW85-1]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCAGAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCTGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCAGAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCTGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
93.125 |
100 |
0.931 |
| comE | Acinetobacter baylyi ADP1 |
39.535 |
100 |
0.425 |