Detailed information NTG0637474

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: N8I87_RS14935
• Genome accession: NZ_CP106798
• Coordinates: 3269457..3270512 (-)
• Length: 351 a.a.
• NCBI ID: WP_263209053.1
• Uniprot ID: -
• Organism: Streptomyces sp. HUAS 15-9
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3264457..3275512

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N8I87_RS14900 (N8I87_14900)	-	3264994..3265935 (+)	942	WP_263209043.1	site-specific integrase	-
N8I87_RS14905 (N8I87_14905)	-	3265916..3266422 (-)	507	WP_263209044.1	HD domain-containing protein	-
N8I87_RS14910 (N8I87_14910)	-	3266384..3266902 (+)	519	WP_263209046.1	hypothetical protein	-
N8I87_RS14915 (N8I87_14915)	-	3267071..3267448 (-)	378	Protein_2948	transcriptional regulator	-
N8I87_RS14920 (N8I87_14920)	-	3267544..3268065 (+)	522	WP_263209048.1	SigE family RNA polymerase sigma factor	-
N8I87_RS14925 (N8I87_14925)	-	3268062..3268754 (+)	693	WP_263209050.1	hypothetical protein	-
N8I87_RS14930 (N8I87_14930)	-	3268785..3269411 (+)	627	WP_263209052.1	hypothetical protein	-
N8I87_RS14935 (N8I87_14935)	cytR	3269457..3270512 (-)	1056	WP_263209053.1	LacI family DNA-binding transcriptional regulator	Regulator
N8I87_RS14940 (N8I87_14940)	-	3270905..3272233 (+)	1329	WP_263209054.1	ABC transporter substrate-binding protein	-
N8I87_RS14945 (N8I87_14945)	-	3272230..3273255 (+)	1026	WP_263209056.1	carbohydrate ABC transporter permease	-
N8I87_RS14950 (N8I87_14950)	-	3273252..3274157 (+)	906	WP_263209058.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 351 a.a.
• Molecular weight: 37717.56 Da
• Isoelectric Point: 6.3192

>NTDB_id=637474 N8I87_RS14935 WP_263209053.1 3269457..3270512(-) (cytR) [Streptomyces sp. HUAS 15-9]
MASHGTRGRSGGRPTLEEVAARAGVGRGTVSRVINGSPRVSEATRAAVEAAVEELGYVPNTAARALAANRTDAIALVVPE
PETRFFAEPYFSDMLRGVGAELADTEMQLLLIFAGSDRERQRLAQYLAAHRVDGVLLVSVHADDPLPDLLSQLEIPAVIS
GPRSAKETLTSVDSDNYGGGRSAVEHLLAGGRRTIAHITGRLDVYGAQRRVDGYRDALRDAGHTVDERLIEPGDFTEEGG
RRAMTKLLERAPGLDAVFAGSDVTAAGARQVLRETGRRIPEDVALVGYDDSAIARHMDPPLTSVRQPIVEMGRAMLNLLL
TDIADRRPAASRGLERRHLVLPTELVTRTSS

Nucleotide

• Length: 1056 bp

>NTDB_id=637474 N8I87_RS14935 WP_263209053.1 3269457..3270512(-) (cytR) [Streptomyces sp. HUAS 15-9]
ATGGCAAGCCACGGAACACGGGGGCGCAGCGGTGGTCGGCCCACCCTCGAAGAGGTCGCCGCCCGCGCCGGTGTCGGCCG
CGGCACGGTCTCCCGGGTGATCAACGGCTCGCCCCGGGTCAGCGAGGCCACCCGCGCGGCCGTCGAGGCGGCGGTCGAGG
AGCTCGGATACGTCCCGAACACCGCGGCCCGCGCCCTGGCCGCCAACCGTACGGACGCGATCGCCCTGGTCGTCCCCGAG
CCGGAGACCCGGTTCTTCGCGGAGCCGTACTTCTCGGACATGCTGCGCGGTGTCGGCGCCGAACTGGCCGACACCGAGAT
GCAGTTGCTGCTGATCTTCGCCGGCAGCGACCGGGAGCGGCAGCGGCTCGCCCAGTATCTGGCCGCGCACCGGGTGGACG
GCGTGCTGTTGGTCTCGGTCCACGCGGACGACCCGCTCCCGGATCTGCTGTCCCAGCTGGAGATCCCGGCGGTGATCAGC
GGCCCCCGCTCGGCGAAGGAGACGCTGACCTCGGTGGACTCGGACAACTACGGCGGCGGCCGCTCGGCCGTCGAGCATCT
GCTCGCCGGCGGCCGCCGTACGATCGCCCACATCACCGGCCGCCTGGACGTGTACGGCGCCCAGCGGCGCGTGGACGGCT
ACCGTGACGCCCTGCGCGACGCGGGCCACACGGTCGACGAGCGGCTCATCGAGCCCGGCGACTTCACCGAGGAGGGCGGC
CGCCGTGCGATGACGAAGCTCCTTGAGCGCGCCCCCGGCCTGGACGCGGTCTTCGCCGGCTCGGACGTGACGGCGGCCGG
CGCCCGCCAGGTGCTGCGCGAGACGGGCCGCCGCATCCCCGAGGACGTGGCCCTGGTCGGTTACGACGACTCGGCGATCG
CCCGCCACATGGACCCGCCCCTCACCAGCGTCCGCCAGCCCATCGTGGAAATGGGCCGCGCGATGCTCAACCTGCTCCTG
ACCGACATCGCGGACCGCCGCCCCGCCGCGTCCCGCGGGCTGGAGCGCCGGCACCTGGTACTGCCGACGGAACTGGTGAC
GCGTACGTCGTCATAG

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (184-351)

• Bacterial regulatory proteins, lacI family (LacI) (15-60)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	36.705	98.575	0.362