Detailed information NTG0063724

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: F6Y14_RS02000
• Genome accession: NZ_AP020322
• Coordinates: 356047..356649 (+)
• Length: 200 a.a.
• NCBI ID: WP_000271550.1
• Uniprot ID: P66748
• Organism: Staphylococcus aureus strain KUH180129
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 351047..361649

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F6Y14_RS01960	-	351063..351182 (+)	120	WP_000840602.1	hypothetical protein	-
F6Y14_RS01965 (KUH180129_0354)	mreC	351381..352223 (+)	843	WP_000911041.1	rod shape-determining protein MreC	-
F6Y14_RS01970 (KUH180129_0355)	mreD	352223..352753 (+)	531	WP_001259925.1	rod shape-determining protein MreD	-
F6Y14_RS01975 (KUH180129_0356)	rplU	352989..353297 (+)	309	WP_000457386.1	50S ribosomal protein L21	-
F6Y14_RS01980 (KUH180129_0357)	-	353303..353623 (+)	321	WP_000633692.1	ribosomal-processing cysteine protease Prp	-
F6Y14_RS01985 (KUH180129_0358)	rpmA	353635..353919 (+)	285	WP_000916187.1	50S ribosomal protein L27	-
F6Y14_RS01990 (KUH180129_0359)	obgE	354273..355565 (+)	1293	WP_000496100.1	GTPase ObgE	-
F6Y14_RS01995 (KUH180129_0360)	-	355578..356033 (+)	456	WP_000368902.1	ACT domain-containing protein	-
F6Y14_RS02000 (KUH180129_0361)	ruvA	356047..356649 (+)	603	WP_000271550.1	Holliday junction branch migration protein RuvA	Machinery gene
F6Y14_RS02005 (KUH180129_0362)	ruvB	356681..357685 (+)	1005	WP_001005768.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
F6Y14_RS02010 (KUH180129_0363)	queA	357687..358712 (+)	1026	WP_001019178.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
F6Y14_RS02015 (KUH180129_0364)	tgt	358735..359874 (+)	1140	WP_001112045.1	tRNA guanosine(34) transglycosylase Tgt	-
F6Y14_RS02020 (KUH180129_0365)	yajC	359893..360153 (+)	261	WP_001160682.1	preprotein translocase subunit YajC	-

Sequence

Protein

• Length: 200 a.a.
• Molecular weight: 22281.50 Da
• Isoelectric Point: 6.1244

>NTDB_id=63724 F6Y14_RS02000 WP_000271550.1 356047..356649(+) (ruvA) [Staphylococcus aureus strain KUH180129]
MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIRTSLIVREDAQLLYGFSSEEEKDMFLSLIKVTGI
GPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAML
ALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS

Nucleotide

• Length: 603 bp

>NTDB_id=63724 F6Y14_RS02000 WP_000271550.1 356047..356649(+) (ruvA) [Staphylococcus aureus strain KUH180129]
ATGTACGCGTATGTCAAAGGTAAGTTAACACATTTATATCCTACACACGTAGTTGTTGAAACTGCTGGTGTTGGTTATGA
AATTCAAACACCAAATTCTTATCGTTTTCAAAAGCATCTAGATCATGAAGTTTTAATTCGTACATCTTTAATTGTTCGTG
AAGATGCACAATTATTGTATGGATTTAGTAGTGAAGAAGAGAAAGATATGTTCTTGAGTTTAATTAAAGTTACTGGTATT
GGTCCGAAATCAGCTTTAGCTATTTTAGCGACAAGTACGCCTAATGAAGTAAAACGTGCCATTGAAAATGAAAATGATAC
GTATTTAACTAAATTCCCAGGAATTGGTAAGAAAACGGCAAGACAGATTGTCTTAGATTTAAAAGGTAAAGTGAAAATCA
CTGAAGAAGATAGCGATTCATTATTACAAGTAGACGCTACTTCGACGGTGCAAGATCAATTCGTGCAAGAAGCAATGTTA
GCGTTAGAAGCATTAGGTTATTCTAAACGAGAGCTTGCAAAAGTTGAGAAAACGTTAAATAAAAATAAATATGACTCAGT
TGATGAAGCTGTTAAGGCAGGTCTTCAATTAGTTGTATCTTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (156-197)

• Helix-hairpin-helix domain (HHH_5) (71-128)

• RuvA N terminal domain (RuvA_N) (1-61)

3D structure

• AlphaFold DB: P66748

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	46.231	99.5	0.46
ruvA	Streptococcus pneumoniae R6	45.729	99.5	0.455
ruvA	Streptococcus pneumoniae D39	45.729	99.5	0.455
ruvA	Bacillus subtilis subsp. subtilis str. 168	43.216	99.5	0.43