Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LSO60_RS13575 Genome accession   NZ_CP089051
Coordinates   2853151..2853534 (-) Length   127 a.a.
NCBI ID   WP_004992473.1    Uniprot ID   A0A3D2SNG5
Organism   Acinetobacter ursingii strain RIVM_C010559     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2848151..2858534
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LSO60_RS13560 (LSO60_13535) - 2850084..2852165 (-) 2082 WP_004992476.1 methyl-accepting chemotaxis protein -
  LSO60_RS13565 (LSO60_13540) - 2852213..2852749 (-) 537 WP_004992475.1 chemotaxis protein CheW -
  LSO60_RS13570 (LSO60_13545) - 2852755..2853123 (-) 369 WP_004992474.1 response regulator -
  LSO60_RS13575 (LSO60_13550) pilG 2853151..2853534 (-) 384 WP_004992473.1 twitching motility response regulator PilG Regulator
  LSO60_RS13580 (LSO60_13555) - 2853840..2854487 (+) 648 WP_004992472.1 hypothetical protein -
  LSO60_RS13585 (LSO60_13560) - 2854548..2855678 (+) 1131 WP_004992470.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14285.38 Da        Isoelectric Point: 4.7278

>NTDB_id=634824 LSO60_RS13575 WP_004992473.1 2853151..2853534(-) (pilG) [Acinetobacter ursingii strain RIVM_C010559]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQSYQ
NIPVIMLSSKDGLFDQAKGRIVGSDEYLTKPFSKDELLNAIRNHVNT

Nucleotide


Download         Length: 384 bp        

>NTDB_id=634824 LSO60_RS13575 WP_004992473.1 2853151..2853534(-) (pilG) [Acinetobacter ursingii strain RIVM_C010559]
ATGGAAGACAAATTTCAAAATCTTAAAGTCATGGTAATTGATGATTCAAAAACCATTCGCCGAACCGCCGAAACGTTACT
ACAACGCGAAGGATGTGAGGTGATTACTGCTGTAGATGGCTTTGAGGCGCTCTCAAAAATAGCTGAAGCGAATCCTGATA
TCGTTTTTGTAGATATCATGATGCCGCGTTTAGATGGTTATCAGACCTGTGCATTGATCAAAAATTCACAGAGTTATCAA
AATATTCCGGTGATTATGCTATCGAGTAAAGATGGTTTATTTGATCAGGCCAAAGGTCGTATTGTCGGTTCAGATGAATA
TTTGACCAAGCCTTTTAGTAAAGATGAATTATTAAACGCTATTCGAAATCACGTAAATACATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3D2SNG5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.063

100

0.961
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37