Detailed information NTG0634782

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: LSO58_RS12280
• Genome accession: NZ_CP089044
• Coordinates: 2585174..2587630 (-)
• Length: 818 a.a.
• NCBI ID: WP_034699655.1
• Uniprot ID: A0AA46NTQ0
• Organism: Acinetobacter ursingii strain RIVM_C010761
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2580174..2592630

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSO58_RS12260 (LSO58_12230)	-	2580401..2581765 (+)	1365	WP_005003150.1	amino acid permease	-
LSO58_RS12265 (LSO58_12235)	-	2582236..2583060 (-)	825	WP_026039882.1	alpha/beta fold hydrolase	-
LSO58_RS12270 (LSO58_12240)	sppA	2583078..2584094 (-)	1017	WP_004990442.1	signal peptide peptidase SppA	-
LSO58_RS12275 (LSO58_12245)	-	2584231..2585205 (+)	975	WP_263503549.1	lysophospholipid acyltransferase family protein	-
LSO58_RS12280 (LSO58_12250)	comA/comEC	2585174..2587630 (-)	2457	WP_034699655.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LSO58_RS12285 (LSO58_12255)	lolD	2587717..2588406 (-)	690	WP_034699653.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
LSO58_RS12290 (LSO58_12260)	-	2588399..2589634 (-)	1236	WP_034699652.1	lipoprotein-releasing ABC transporter permease subunit	-
LSO58_RS12295 (LSO58_12265)	-	2589661..2590230 (+)	570	WP_004990450.1	PilZ domain-containing protein	-
LSO58_RS12300 (LSO58_12270)	-	2590248..2591183 (-)	936	WP_263503550.1	DMT family transporter	-
LSO58_RS12305 (LSO58_12275)	-	2591193..2591666 (-)	474	WP_004990454.1	YaiI/YqxD family protein	-

Sequence

Protein

• Length: 818 a.a.
• Molecular weight: 93416.71 Da
• Isoelectric Point: 8.8218

>NTDB_id=634782 LSO58_RS12280 WP_034699655.1 2585174..2587630(-) (comA/comEC) [Acinetobacter ursingii strain RIVM_C010761]
MLKIILLGWIAGISLMGYSLPYLKSIGVYFIVFVLILWMIYFVKIKTCSENISFKAVLIASSTFGMLILGDLYADHALTE
HLKYKEMTSRRASEVIYIRKIGESTEHGIKQPIEILSQNKPTVIWLAYIDDQLLENMQINNNSLALGQYYQVQGIVKPVH
GYANAGGFDQEKWFVQQNWMSGFQVQQIQPLSMQQVYGLGFQQHLKQQNNLWYKFSLNIEQLRLDFRIQLQQQPLKYKAL
MLALLTGDRSLLDKNTEQMFQRFGISHLLAISGPHVLILAALFTWLLSSIIHKYQPTLYLRFPRKILMIVPFCGCVFIYT
AFVGFEIPALRTLLFTMIASLFLIFKHEIRPFNLLLYTASFSVWIDPLSILSAAFWLSYGACFILLNIYQSMQHQSDSVP
NLRQKIWKNSKILVQSQWKIFIALCPLVLIFFKQLSWIAPIANLIVIPFLGGVIVPLGIIAACISLIIPSLGQLLFHIND
LLISLLFFILNGLDYLFQPELYAFALTPMLLLSFSLGIVLLFLPSGGIPKSWAVLCICPIFLLAWIKRDTQISVIDVGQG
QSVFVQDASLRMLIDTGGYYDESKFSIGQNVVVPYLKSQGVAQLDRILLSHLDQDHSGALAAVLQQTRVKHLMANETLPQ
PTLSLQTGTSFSRCYTGQTWQTPEIRLQILSPEPVDDQTIQYNRNEYSCVVYLELLKANGLRRFLIMGDAGWETEYQIFQ
KYPDLKVDVLVLGHHGSKHSSSYDFLKHYQPKIAVASVGYTNRYGHPSLETLSRLDALHIPLYTTIQSGTITFKVEDHEV
KLEQYRNTVKWLNLYKSY

Nucleotide

• Length: 2457 bp

>NTDB_id=634782 LSO58_RS12280 WP_034699655.1 2585174..2587630(-) (comA/comEC) [Acinetobacter ursingii strain RIVM_C010761]
ATGTTAAAAATTATATTGTTGGGATGGATTGCAGGCATCAGTTTGATGGGATATTCATTGCCTTACCTGAAATCGATCGG
CGTTTATTTTATTGTATTTGTTTTGATTTTATGGATGATTTATTTTGTAAAAATAAAAACATGCAGCGAAAATATATCCT
TTAAAGCAGTTCTAATCGCAAGTTCAACATTTGGTATGTTGATACTTGGTGATCTATACGCAGATCATGCCTTGACTGAA
CATCTTAAATATAAAGAAATGACGTCAAGAAGGGCATCTGAAGTCATCTATATTCGAAAAATCGGAGAAAGTACAGAACA
CGGAATTAAGCAGCCTATTGAAATTTTATCTCAAAATAAACCTACTGTTATATGGCTAGCCTATATTGATGATCAGCTTT
TGGAAAATATGCAGATTAACAATAATAGCTTAGCACTAGGACAATATTATCAGGTACAAGGAATCGTGAAGCCTGTGCAT
GGTTATGCGAATGCAGGAGGATTCGATCAGGAAAAGTGGTTTGTTCAGCAAAACTGGATGTCAGGCTTTCAAGTCCAACA
GATTCAGCCCCTATCGATGCAACAAGTTTATGGTTTGGGTTTTCAGCAACATCTCAAACAGCAAAATAATCTCTGGTACA
AATTTAGTCTAAATATTGAGCAATTGCGACTGGATTTTCGTATTCAATTACAACAGCAACCTCTGAAATATAAAGCGCTG
ATGCTGGCGCTGTTGACAGGTGATCGTAGTTTATTGGATAAAAATACGGAACAAATGTTTCAGCGCTTTGGTATTTCACA
TTTACTGGCGATCTCTGGTCCACATGTACTCATCTTGGCGGCATTATTTACATGGCTACTAAGCTCCATAATCCATAAAT
ACCAGCCCACACTTTATTTAAGATTTCCCAGAAAAATTTTAATGATTGTGCCATTTTGTGGTTGTGTCTTTATTTATACT
GCATTTGTGGGCTTTGAAATTCCAGCATTACGCACCTTATTATTCACCATGATTGCCAGTTTATTCTTAATCTTTAAACA
TGAAATTCGACCGTTTAATTTGCTGTTATATACCGCCAGTTTCAGTGTATGGATTGATCCATTGAGTATTTTATCGGCTG
CTTTTTGGTTATCTTATGGTGCTTGTTTTATTTTGTTGAATATTTATCAATCCATGCAGCATCAGTCAGATTCAGTACCT
AATCTAAGGCAAAAGATCTGGAAAAACAGCAAAATATTGGTTCAATCGCAATGGAAAATTTTTATTGCTTTATGTCCACT
GGTGCTTATATTTTTTAAACAGCTGTCTTGGATCGCACCGATTGCCAATCTGATTGTGATCCCATTTTTAGGTGGGGTGA
TCGTGCCACTGGGCATTATTGCAGCTTGTATCTCCTTGATCATTCCGTCTTTGGGACAGCTACTTTTTCATATTAATGAC
TTATTAATAAGTCTTTTATTTTTTATTTTAAACGGTCTGGATTATCTTTTTCAGCCTGAGCTGTATGCATTTGCTTTAAC
TCCCATGCTTTTACTCAGTTTTAGTCTCGGTATTGTGTTGTTATTTTTACCTAGCGGTGGTATTCCAAAGTCATGGGCAG
TGTTATGTATTTGCCCCATATTTTTATTGGCATGGATTAAACGGGATACACAGATATCGGTGATTGATGTAGGGCAAGGG
CAGTCTGTTTTTGTACAAGATGCATCTCTGCGTATGCTGATTGATACGGGCGGTTATTATGATGAAAGCAAATTTAGTAT
TGGTCAAAATGTTGTGGTTCCTTATTTAAAATCTCAAGGGGTTGCACAACTTGATCGTATTTTACTTTCTCATTTGGATC
AGGATCATAGTGGAGCGCTTGCTGCTGTTTTGCAGCAAACCAGAGTCAAGCATTTAATGGCCAATGAAACCCTACCACAG
CCCACATTATCGTTACAAACAGGCACTTCTTTTTCCAGATGTTATACGGGTCAAACATGGCAGACCCCAGAGATACGCTT
ACAAATACTCTCTCCAGAACCTGTTGATGATCAAACAATTCAATACAACCGAAATGAATATTCTTGCGTGGTCTATCTGG
AGCTATTAAAGGCGAATGGTTTACGTCGATTTTTAATTATGGGCGATGCTGGCTGGGAGACCGAATATCAAATTTTTCAA
AAGTATCCCGACTTAAAAGTTGATGTTTTGGTGCTGGGGCATCATGGTAGCAAGCACAGCTCATCTTATGATTTTTTAAA
ACATTATCAGCCTAAAATCGCGGTTGCATCCGTTGGATATACCAATCGTTATGGACATCCGAGTTTAGAGACATTATCTA
GATTAGATGCTTTACATATTCCGCTTTATACCACGATCCAGTCAGGAACGATCACGTTTAAGGTGGAAGATCATGAAGTA
AAACTGGAACAATATCGAAATACAGTTAAGTGGCTGAACCTGTACAAGTCATATTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (556-641)

• Competence protein (Competence) (244-523)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baylyi ADP1	53.26	99.389	0.529
comA/comEC	Acinetobacter baumannii strain A118	48.526	99.511	0.483
comA/comEC	Acinetobacter baumannii D1279779	48.403	99.511	0.482