Detailed information NTG0634569

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: N8A75_RS14970
• Genome accession: NZ_CP104878
• Coordinates: 2719649..2720254 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain 4ZT
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2714649..2725254

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N8A75_RS14940 (N8A75_14940)	-	2715462..2715851 (+)	390	WP_031315243.1	TIGR04086 family membrane protein	-
N8A75_RS14945 (N8A75_14945)	yajC	2715908..2716174 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
N8A75_RS14950 (N8A75_14950)	tgt	2716211..2717356 (-)	1146	WP_129110539.1	tRNA guanosine(34) transglycosylase Tgt	-
N8A75_RS14955 (N8A75_14955)	queA	2717383..2718411 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
N8A75_RS14960 (N8A75_14960)	yrzS	2718441..2718641 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
N8A75_RS14965 (N8A75_14965)	ruvB	2718634..2719638 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
N8A75_RS14970 (N8A75_14970)	ruvA	2719649..2720254 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
N8A75_RS14975 (N8A75_14975)	bofC	2720393..2720905 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
N8A75_RS14980 (N8A75_14980)	csbX	2720953..2722260 (-)	1308	WP_015483512.1	MFS transporter	-
N8A75_RS14985 (N8A75_14985)	iolG	2722331..2723356 (-)	1026	WP_124048044.1	inositol 2-dehydrogenase	-
N8A75_RS14990 (N8A75_14990)	yrzF	2723594..2724241 (+)	648	WP_129110540.1	phosphotransferase	-
N8A75_RS14995 (N8A75_14995)	-	2724287..2724409 (-)	123	WP_003229707.1	hypothetical protein	-
N8A75_RS15005 (N8A75_15005)	-	2724572..2724940 (+)	369	WP_224588654.1	DUF5412 family protein	-
N8A75_RS15010 (N8A75_15010)	-	2724947..2725087 (+)	141	WP_029727127.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=634569 N8A75_RS14970 WP_003229717.1 2719649..2720254(-) (ruvA) [Bacillus subtilis strain 4ZT]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=634569 N8A75_RS14970 WP_003229717.1 2719649..2720254(-) (ruvA) [Bacillus subtilis strain 4ZT]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408