Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   LRP64_RS09610 Genome accession   NZ_CP088158
Coordinates   1966525..1967568 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain 697     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1961525..1972568
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LRP64_RS09580 (LRP64_09580) - 1961947..1963203 (-) 1257 WP_078065149.1 aminopeptidase -
  LRP64_RS09585 (LRP64_09585) - 1963206..1963406 (-) 201 WP_000180460.1 DUF1128 family protein -
  LRP64_RS09590 (LRP64_09590) - 1963553..1964017 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  LRP64_RS09595 (LRP64_09595) - 1964024..1964299 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  LRP64_RS09600 (LRP64_09600) - 1964577..1965821 (+) 1245 WP_064125696.1 YihY/virulence factor BrkB family protein -
  LRP64_RS09605 (LRP64_09605) vraR 1965906..1966535 (-) 630 WP_000153526.1 two-component system response regulator VraR Regulator
  LRP64_RS09610 (LRP64_09610) vraS 1966525..1967568 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  LRP64_RS09615 (LRP64_09615) liaF 1967565..1968266 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  LRP64_RS09620 (LRP64_09620) - 1968281..1968667 (-) 387 WP_240696954.1 hypothetical protein -
  LRP64_RS09625 (LRP64_09625) map 1968884..1969642 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  LRP64_RS09630 (LRP64_09630) - 1970171..1971157 (+) 987 WP_000999708.1 aromatic acid exporter family protein -
  LRP64_RS09635 (LRP64_09635) - 1971590..1972003 (-) 414 WP_025174552.1 hypothetical protein -
  LRP64_RS09640 (LRP64_09640) - 1972032..1972142 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=633040 LRP64_RS09610 WP_001017131.1 1966525..1967568(-) (vraS) [Staphylococcus aureus strain 697]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=633040 LRP64_RS09610 WP_001017131.1 1966525..1967568(-) (vraS) [Staphylococcus aureus strain 697]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGTATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAACGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGATCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1