Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LPS07_RS03270 Genome accession   NZ_CP087716
Coordinates   668643..669026 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain AP2044     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 663643..674026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LPS07_RS03260 (LPS07_03260) nolF 666544..667653 (-) 1110 WP_081318459.1 efflux RND transporter periplasmic adaptor subunit -
  LPS07_RS03265 (LPS07_03265) - 667722..668360 (-) 639 WP_069119208.1 hypothetical protein -
  LPS07_RS03270 (LPS07_03270) pilG 668643..669026 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  LPS07_RS03275 (LPS07_03275) pilH 669049..669411 (+) 363 WP_002116220.1 response regulator -
  LPS07_RS03280 (LPS07_03280) pilI 669472..670008 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  LPS07_RS03285 (LPS07_03285) pilJ 670051..672129 (+) 2079 WP_032052669.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=631204 LPS07_RS03270 WP_000389061.1 668643..669026(+) (pilG) [Acinetobacter pittii strain AP2044]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=631204 LPS07_RS03270 WP_000389061.1 668643..669026(+) (pilG) [Acinetobacter pittii strain AP2044]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGCGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37