Detailed information NTG0630722

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: NDL71_RS01115
• Genome accession: NZ_CP104546
• Coordinates: 188666..189250 (+)
• Length: 194 a.a.
• NCBI ID: WP_262668717.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 9035
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 183666..194250

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDL71_RS01080 (NDL71_09215)	-	184406..184516 (+)	111	Protein_203	IS5/IS1182 family transposase	-
NDL71_RS01085 (NDL71_09220)	-	184597..185385 (-)	789	WP_262668642.1	class I SAM-dependent methyltransferase	-
NDL71_RS01090 (NDL71_09225)	bioH	185387..186130 (-)	744	WP_324256012.1	pimeloyl-ACP methyl ester esterase BioH	-
NDL71_RS01095 (NDL71_09230)	-	186129..186854 (+)	726	WP_136817437.1	ComF family protein	-
NDL71_RS01100 (NDL71_09235)	trmL	186919..187383 (+)	465	WP_123771794.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
NDL71_RS01105 (NDL71_09240)	-	187511..188197 (+)	687	WP_003696139.1	septal ring lytic transglycosylase RlpA family protein	-
NDL71_RS01110 (NDL71_09245)	-	188258..188584 (+)	327	WP_003689921.1	PepSY domain-containing protein	-
NDL71_RS01115 (NDL71_09250)	ruvA	188666..189250 (+)	585	WP_262668717.1	Holliday junction branch migration protein RuvA	Machinery gene
NDL71_RS01120 (NDL71_09255)	-	189250..189387 (+)	138	WP_003689926.1	hypothetical protein	-
NDL71_RS01125 (NDL71_09260)	-	189414..191270 (+)	1857	WP_033910127.1	ABC transporter ATP-binding protein	-
NDL71_RS01130 (NDL71_09265)	rsgA	191275..192198 (+)	924	WP_003689928.1	ribosome small subunit-dependent GTPase A	-
NDL71_RS01135 (NDL71_09270)	-	192311..192535 (+)	225	WP_003689929.1	exodeoxyribonuclease VII small subunit	-
NDL71_RS01140 (NDL71_09275)	-	192519..193415 (+)	897	WP_003691917.1	polyprenyl synthetase family protein	-
NDL71_RS01145 (NDL71_09280)	-	193532..193831 (-)	300	WP_010359269.1	DUF2818 family protein	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 20815.10 Da
• Isoelectric Point: 7.2071

>NTDB_id=630722 NDL71_RS01115 WP_262668717.1 188666..189250(+) (ruvA) [Neisseria gonorrhoeae strain 9035]
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGG
IGAKTALGILSAMTADDLARAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDRLFAASPAADETEDIVSTLLA
LGYNEREAKAAVKGVPKGTDVGEGVRLALKNLLK

Nucleotide

• Length: 585 bp

>NTDB_id=630722 NDL71_RS01115 WP_262668717.1 188666..189250(+) (ruvA) [Neisseria gonorrhoeae strain 9035]
ATGATCAGCAGACTGACCGGCAAACTGGTTGAAAAAAACCCTCCGCAAATCGTCATCGATGTCAACGGTGTCGGTTATGA
AGCCGACGTATCGATGCAGACCTTCTACAACCTGCCGCCCGTGGGTGAAAGCGTACAACTGTTTACCCAGCTTATCATTC
GGGAAGACGCACATCTTTTATTTGGTTTTGCCACTGCGGAAGAACGCAAGACCTTCCGCCAACTGATTAAGGTCGGCGGC
ATCGGCGCGAAAACGGCTTTGGGCATTTTGTCGGCGATGACGGCAGACGATCTGGCGCGGGCGGTTGCAGAAGAAGATGT
CAAACGCCTCTCCTCCGCTCCGGGAATCGGCAAAAAAACCGCCGAACGTATGGTCTTGGAACTGCGCGGCAAGCTGGTCG
CGCATACGGTAACGGACAGGCTGTTTGCCGCCTCACCCGCCGCCGACGAAACGGAAGACATCGTCAGCACGCTGCTTGCG
CTGGGTTACAACGAACGCGAGGCAAAAGCGGCGGTCAAAGGCGTTCCGAAGGGGACGGACGTGGGCGAAGGCGTGCGCCT
TGCCCTGAAAAACCTGCTGAAATAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (150-192)

• RuvA N terminal domain (RuvA_N) (1-62)

• Helix-hairpin-helix domain (HHH_5) (72-129)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	37.5	100	0.387
ruvA	Streptococcus pneumoniae R6	37.5	100	0.387
ruvA	Streptococcus pneumoniae D39	37.5	100	0.387
ruvA	Bacillus subtilis subsp. subtilis str. 168	34.951	100	0.371