Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   N596_RS08645 Genome accession   NC_022584
Coordinates   1818854..1820113 (+) Length   419 a.a.
NCBI ID   WP_023022155.1    Uniprot ID   -
Organism   Streptococcus ilei     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1813854..1825113
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N596_RS08620 (N596_08870) clpC 1813958..1816063 (+) 2106 WP_023027642.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  N596_RS08625 (N596_08875) - 1816354..1816599 (+) 246 WP_023022151.1 hypothetical protein -
  N596_RS08630 (N596_08880) yajC 1816787..1817116 (+) 330 WP_023027643.1 preprotein translocase subunit YajC -
  N596_RS08635 (N596_08885) - 1817248..1817997 (+) 750 WP_023027644.1 isoprenyl transferase -
  N596_RS08640 (N596_08890) - 1818009..1818812 (+) 804 WP_023027645.1 phosphatidate cytidylyltransferase -
  N596_RS08645 (N596_08895) eeP 1818854..1820113 (+) 1260 WP_023022155.1 RIP metalloprotease RseP Regulator
  N596_RS08650 (N596_08900) - 1820131..1821981 (+) 1851 WP_023027646.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 46282.75 Da        Isoelectric Point: 6.1733

>NTDB_id=62981 N596_RS08645 WP_023022155.1 1818854..1820113(+) (eeP) [Streptococcus ilei]
MQFIAFIIIFGVIVLVHEFGHFYFAKKSGILVREFAIGMGPKIFAHVGKDGTAYTIRILPLGGYVRMAGWGEDTTEIKTG
TPVSLTLNPEGTVVRINLSGKNIDQTALPMNVTDFDFEDKLQITGIVIEETKTYPVHHDATIVEEDGTEVRIAPLDVQYQ
NASIWGRLMTNFAGPMNNFILSIVVYSLLAFMQGGAVDYYSNHVQVVPQGVVAKAGLKDNDQIVQINEYKVSNWDELTDS
VQKATRNQGKNPEVTITYERDGKTQKVTVQPEEDGGRYYIGVTNAVKTGFLDKLFSGVTDTWYTATRILTALKDIIFHFS
LNKLGGPVAIYKASSQAAELGLPAILSLMAMLSINIGIFNLIPIPALDGGKILINLIELVRRKPLKQEVETYLTLAGVAV
MVILMIAVTWNDIMKLFLK

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=62981 N596_RS08645 WP_023022155.1 1818854..1820113(+) (eeP) [Streptococcus ilei]
ATGCAATTTATTGCCTTTATTATCATTTTTGGCGTCATTGTCCTGGTACATGAGTTCGGCCATTTCTATTTTGCAAAGAA
ATCAGGCATCCTTGTTCGCGAGTTTGCGATTGGGATGGGGCCCAAGATTTTTGCCCATGTAGGCAAAGACGGAACAGCCT
ATACTATTCGAATCCTTCCATTGGGGGGCTATGTCCGAATGGCAGGCTGGGGCGAAGATACAACAGAGATTAAGACAGGA
ACGCCTGTCAGTCTAACTTTGAACCCTGAGGGAACAGTTGTTCGGATCAACCTTTCTGGGAAAAATATCGATCAGACAGC
TCTTCCCATGAATGTCACAGATTTTGATTTTGAGGATAAACTTCAAATTACAGGAATCGTTATCGAAGAGACCAAAACTT
ATCCTGTCCACCATGATGCAACCATCGTTGAGGAAGATGGGACAGAAGTACGGATTGCTCCTCTGGATGTGCAGTATCAA
AACGCTAGTATCTGGGGACGCCTGATGACCAACTTTGCTGGTCCAATGAACAACTTTATCTTAAGTATTGTCGTGTACTC
TCTCCTTGCCTTTATGCAGGGAGGTGCAGTGGACTACTATAGCAACCATGTTCAGGTCGTTCCCCAAGGAGTGGTGGCTA
AGGCTGGTTTGAAAGACAATGACCAGATCGTTCAAATCAATGAATACAAGGTCTCCAACTGGGATGAGTTGACAGATTCT
GTCCAGAAGGCGACCCGTAACCAAGGAAAAAATCCAGAAGTAACGATTACCTATGAACGAGACGGGAAAACTCAAAAAGT
GACGGTTCAACCAGAAGAAGATGGGGGACGGTATTATATCGGTGTGACCAATGCTGTCAAGACAGGCTTCCTAGATAAGC
TTTTCTCAGGTGTGACAGATACTTGGTACACAGCAACTCGTATTTTGACGGCCTTGAAGGATATCATCTTCCACTTTAGT
TTGAACAAGTTGGGTGGTCCGGTAGCGATCTACAAAGCTAGTTCGCAAGCTGCGGAGCTAGGACTTCCAGCTATCCTATC
CTTGATGGCCATGCTGTCTATTAATATCGGAATCTTTAACTTGATTCCTATTCCGGCTTTGGATGGTGGGAAAATCTTGA
TCAATCTGATCGAGCTTGTTCGTAGAAAACCTCTTAAACAGGAGGTAGAAACCTACTTGACCCTTGCTGGAGTGGCGGTC
ATGGTTATTTTGATGATTGCTGTGACTTGGAACGATATCATGAAATTATTTTTGAAATAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(5-404)

PDZ domain (PDZ_2)

(204-269)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

65.385

99.284

0.649
  eeP Streptococcus thermophilus LMG 18311

65.144

99.284

0.647

Multiple sequence alignment