Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   N4P55_RS26770 Genome accession   NZ_CP104408
Coordinates   5853467..5853874 (-) Length   135 a.a.
NCBI ID   WP_003176671.1    Uniprot ID   A0A1S2UZG3
Organism   Pseudomonas fluorescens strain Ant01     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5848467..5858874
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N4P55_RS26755 (N4P55_26770) - 5850470..5852521 (-) 2052 WP_064454539.1 methyl-accepting chemotaxis protein -
  N4P55_RS26760 (N4P55_26775) - 5852518..5853042 (-) 525 WP_064454540.1 chemotaxis protein CheW -
  N4P55_RS26765 (N4P55_26780) pilH 5853055..5853420 (-) 366 WP_014720320.1 twitching motility response regulator PilH Machinery gene
  N4P55_RS26770 (N4P55_26785) pilG 5853467..5853874 (-) 408 WP_003176671.1 twitching motility response regulator PilG Regulator
  N4P55_RS26775 (N4P55_26790) gshB 5854114..5855067 (+) 954 WP_064454541.1 glutathione synthase -
  N4P55_RS26780 (N4P55_26795) - 5855145..5856050 (+) 906 WP_262666471.1 energy transducer TonB -
  N4P55_RS26785 (N4P55_26800) - 5856118..5856687 (+) 570 WP_057022840.1 YqgE/AlgH family protein -
  N4P55_RS26790 (N4P55_26805) ruvX 5856687..5857124 (+) 438 WP_003213744.1 Holliday junction resolvase RuvX -
  N4P55_RS26795 (N4P55_26810) pyrR 5857208..5857714 (+) 507 WP_064454543.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  N4P55_RS26800 (N4P55_26815) - 5857739..5858743 (+) 1005 WP_259763341.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14936.43 Da        Isoelectric Point: 7.3842

>NTDB_id=629360 N4P55_RS26770 WP_003176671.1 5853467..5853874(-) (pilG) [Pseudomonas fluorescens strain Ant01]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLSAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=629360 N4P55_RS26770 WP_003176671.1 5853467..5853874(-) (pilG) [Pseudomonas fluorescens strain Ant01]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACGTGGGGTGCGATGTCATCACGGCCATCGACGGTTTCGATGCATTGGCCCGGATTGTTGATCACCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGGTGAAGAATAATCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTTGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAGTGCGATCAAGGCCTATGTGCCAGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1S2UZG3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

92.593

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363