Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   N597_RS06140 Genome accession   NC_022582
Coordinates   1251678..1252682 (-) Length   334 a.a.
NCBI ID   WP_006595886.1    Uniprot ID   A0A127TTE3
Organism   Streptococcus ilei     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1246678..1257682
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N597_RS06125 (N597_06320) thrS 1246933..1248876 (-) 1944 WP_023023925.1 threonine--tRNA ligase -
  N597_RS06130 (N597_06325) - 1249260..1250582 (-) 1323 WP_023023927.1 glycosyltransferase family 4 protein -
  N597_RS06135 (N597_06330) - 1250584..1251582 (-) 999 WP_023023929.1 glycosyltransferase family 4 protein -
  N597_RS06140 (N597_06335) ccpA 1251678..1252682 (-) 1005 WP_006595886.1 catabolite control protein A Regulator
  N597_RS06145 (N597_06340) - 1252843..1253925 (+) 1083 WP_023023931.1 Xaa-Pro peptidase family protein -
  N597_RS06150 (N597_06345) - 1253950..1254288 (+) 339 WP_023023933.1 cytochrome o ubiquinol oxidase -
  N597_RS06155 (N597_06350) - 1254386..1254835 (-) 450 WP_023023935.1 Rrf2 family transcriptional regulator -
  N597_RS06160 (N597_06355) - 1254979..1255821 (-) 843 WP_023023937.1 metallophosphoesterase -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37005.12 Da        Isoelectric Point: 6.6646

>NTDB_id=62917 N597_RS06140 WP_006595886.1 1251678..1252682(-) (ccpA) [Streptococcus ilei]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVTLLAKRNKKIAFVSGPLVDDINGKIRLAGYKDALKAKKLSYSEGLVFESKYRYEEGYNLAERIIASK
ATAAFVTGDELAAGLLNGLADQGVNVPEDFELITSDDSQITRYTRPNLSTVGQPLYDLGAISMRMLTKIMHKEELEEREV
LLAHTINHRGTTKK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=62917 N597_RS06140 WP_006595886.1 1251678..1252682(-) (ccpA) [Streptococcus ilei]
ATGAATACAGACGATACTGTAACCATTTACGACGTTGCCCGAGAGGCGGGTGTCTCAATGGCGACTGTTAGCCGTGTCGT
GAACGGAAATAAGAACGTTAAGGAAAATACTCGTAAAAAAGTATTGGAAGTCATTGAACGTTTGGACTATCGTCCGAATG
CAGTAGCTCGTGGACTTGCGAGTAAGAAAACCACAACGGTAGGTGTTGTGATTCCAAATATTACCAATAGTTATTTCTCT
ACTCTGGCAAAGGGGATCGATGACATTGCTGAAATGTACAAGTACAACATCGTCCTTGCCAACAGCGATGAAGACGATGA
TAAAGAAGTTTCTGTTGTCAATACTCTTTTCTCAAAACAGGTCGATGGGATTATCTTCATGGGTTATCACTTGACAGAAA
AGATTCGTTCAGAATTCTCTCGTTCTCGGACACCGGTGGTCCTTGCTGGGACAGTTGATGTCGAACATCAATTGCCAAGT
GTCAATATCGATTACAAGCAAGCGACAGTAGACGCGGTTACATTATTGGCTAAACGAAATAAAAAGATTGCTTTTGTAAG
TGGACCATTAGTAGATGATATCAACGGTAAGATTCGCTTGGCTGGCTACAAAGATGCTTTGAAAGCAAAAAAATTGTCTT
ACAGTGAAGGCTTGGTCTTTGAGTCTAAGTACCGCTATGAAGAAGGCTATAACTTGGCTGAACGCATCATTGCATCTAAA
GCAACAGCAGCCTTTGTAACTGGGGATGAATTGGCAGCAGGTTTGCTTAATGGTCTAGCTGATCAAGGTGTGAACGTACC
GGAAGATTTTGAGTTGATTACCAGTGATGATTCACAAATTACACGCTACACTCGTCCAAATCTTTCAACTGTTGGCCAAC
CACTTTATGATTTGGGGGCTATCAGTATGCGGATGCTGACAAAAATTATGCATAAGGAAGAATTGGAAGAAAGAGAAGTT
CTTCTTGCCCATACCATCAATCATCGTGGGACTACGAAGAAGTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(175-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A127TTE3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

91.018

100

0.91
  ccpA Streptococcus pneumoniae D39

85.03

100

0.85
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.1

99.102

0.566

Multiple sequence alignment