Detailed information NTG0628878

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: LO010_RS04810
• Genome accession: NZ_CP087335
• Coordinates: 1019515..1021947 (+)
• Length: 810 a.a.
• NCBI ID: WP_000472726.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain DB053
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1014515..1026947

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LO010_RS04785	-	1014666..1015607 (-)	942	WP_000795874.1	hypothetical protein	-
LO010_RS04790	-	1015864..1016349 (+)	486	WP_001985538.1	YaiI/YqxD family protein	-
LO010_RS04795	-	1016360..1017268 (+)	909	WP_001140077.1	DMT family transporter	-
LO010_RS20840	-	1017298..1017378 (-)	81	Protein_920	PilZ domain-containing protein	-
LO010_RS04800	-	1017516..1018751 (+)	1236	WP_032001206.1	lipoprotein-releasing ABC transporter permease subunit	-
LO010_RS04805	lolD	1018744..1019430 (+)	687	WP_000049406.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
LO010_RS04810	comA/comEC	1019515..1021947 (+)	2433	WP_000472726.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LO010_RS04815	-	1021900..1022883 (-)	984	WP_001984639.1	lysophospholipid acyltransferase family protein	-
LO010_RS04820	sppA	1023020..1024036 (+)	1017	WP_001286615.1	signal peptide peptidase SppA	-
LO010_RS04825	-	1024055..1024864 (+)	810	WP_000114071.1	alpha/beta fold hydrolase	-
LO010_RS04830	purN	1024928..1025557 (-)	630	WP_000975527.1	phosphoribosylglycinamide formyltransferase	-
LO010_RS04835	purM	1025554..1026624 (-)	1071	WP_000071984.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92543.04 Da
• Isoelectric Point: 8.8496

>NTDB_id=628878 LO010_RS04810 WP_000472726.1 1019515..1021947(+) (comA/comEC) [Acinetobacter baumannii strain DB053]
MFKIILLGWIGGIALMGIDFPLIMQYEKVGKALLLLAFIFYLYKRPMFVDRPFLKAVFCLLCTTSLFMVGYYYAEKALIE
RLEQRETDTRNLDIIVYINRLSEEKDNKVQQTAQILNLSKEPVNWLLYLKSNNQNLLKNNQNLELGHYYRISGKTRPAHS
YATPGAFDQEKWFIQRNIMSGFNVRYIEPLSLDEIYRLGYQQHLKEQQSFSNSFRLNIEKLRLTFRQILNSSSLQQKGLI
LALLTGDESLLSDETQLQFKQLGISHLLAISGPHVLIFAIMLSWACHQFISRYYPQIYLWKPKQILMAVPCCLGVLIYTA
FVGFEIPALRTLLSVFIFIGFLLLKQPIKPFTLLVYSASLLLLIDPFSVFSAGFWLSYGACFILLRIYQTIAQLPEQHFL
SLSSKMIFMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGGVIVPLNIIAACAWFIVKPFGNMLFHFND
MLLSILLSCLGLLEKLSLPLQGISLTPLSLLAISCAIIILFLPKGILPKTWGILCCLPLVIMNKMSQQIQLNILDVGQGQ
AIFLQHSEQKWLIDTGGSYDEKIFSIGQNVVVPFLRQQGVRQLDHVVLSHLDQDHSGAFPLIQQEIPVKQLISNEQLPND
LKQPFQYCHQGQQWHYPELDIQILWPKEKDLAFVASNQNQYSCVVYLQFKKVAGYQNFLIMGDAGWEAEYELLKDYPNLK
IDVLVLGHHGSKHSSAYDFLATLKPKLAIASAGFDNRYGHPSQQVIARLKALHIPLKSTVEQGTLSFVLENHKIVLHDRR
LDRLWLSRGF

Nucleotide

• Length: 2433 bp

>NTDB_id=628878 LO010_RS04810 WP_000472726.1 1019515..1021947(+) (comA/comEC) [Acinetobacter baumannii strain DB053]
ATGTTTAAGATTATTCTATTGGGGTGGATTGGCGGTATTGCATTGATGGGAATAGATTTCCCTTTAATCATGCAATATGA
AAAAGTGGGCAAGGCTCTACTGTTACTTGCCTTTATTTTTTATCTTTATAAACGACCAATGTTCGTTGATCGACCATTTT
TAAAGGCAGTGTTTTGCTTATTATGTACAACAAGTCTTTTTATGGTTGGTTACTACTATGCTGAAAAAGCACTGATTGAA
CGATTAGAACAAAGAGAAACAGATACCCGAAATCTCGACATTATTGTTTATATAAACCGTTTAAGTGAAGAAAAAGATAA
TAAGGTTCAACAAACTGCACAAATTTTAAATCTTTCTAAAGAACCGGTAAATTGGTTGCTATATTTAAAAAGTAATAATC
AAAATTTATTAAAGAATAATCAGAATCTTGAATTAGGTCACTATTATCGAATATCTGGAAAAACAAGACCTGCGCATAGT
TATGCCACCCCAGGAGCTTTTGATCAGGAAAAGTGGTTTATTCAGCGAAATATTATGTCTGGTTTTAACGTGAGATATAT
TGAGCCTTTAAGCCTTGATGAAATCTATCGATTAGGCTATCAGCAACATTTAAAAGAACAACAGTCTTTTTCCAATAGTT
TTCGTTTAAATATAGAAAAACTTCGCTTAACTTTTAGGCAAATATTAAACAGCTCATCTCTACAGCAAAAGGGTTTAATT
TTAGCTTTGCTGACAGGTGATGAAAGCCTTTTATCAGATGAAACTCAACTACAGTTCAAACAATTAGGAATTAGTCATTT
ATTGGCGATCTCAGGCCCACATGTGCTCATTTTTGCCATTATGTTATCTTGGGCATGTCATCAATTTATCAGTCGTTATT
ATCCTCAAATTTACTTATGGAAACCGAAACAGATTTTGATGGCTGTACCATGCTGCCTTGGTGTTTTAATTTATACTGCA
TTTGTAGGTTTCGAAATTCCTGCACTACGAACATTATTATCAGTATTTATATTTATTGGATTTCTATTATTAAAACAACC
TATTAAACCTTTTACATTACTCGTATATAGCGCAAGTCTACTGTTGCTAATTGACCCGTTTAGTGTGTTTTCTGCAGGTT
TTTGGCTGTCTTATGGGGCATGCTTTATTTTATTAAGAATTTACCAAACTATAGCGCAGCTACCTGAGCAACATTTTTTA
AGTCTGAGCTCAAAAATGATTTTTATGAGTAAGGTGTTAATTGAGTCTCAAGGCAAAATATTTATTGCATTGAGTCCCTT
AACCTTACTTTTCTTTCAACAAATTTCTTGGGTTGCTCCATTAACCAATATTATTGCCGTGCCTATTGTTGGTGGTGTTA
TTGTCCCTTTAAACATCATAGCTGCTTGCGCATGGTTTATAGTAAAACCATTTGGAAATATGCTTTTTCATTTCAATGAT
ATGTTGCTCAGCATATTGCTGAGTTGTTTGGGCTTATTAGAAAAACTTTCTTTACCATTACAAGGTATAAGCTTGACGCC
ACTGTCTTTATTGGCGATTAGCTGTGCCATTATTATTTTATTTTTACCTAAAGGAATTCTGCCCAAAACTTGGGGGATAT
TATGTTGTTTACCCTTGGTTATTATGAACAAAATGAGTCAGCAAATTCAGCTTAATATTTTAGATGTTGGGCAGGGGCAG
GCCATTTTTTTACAACATTCCGAACAAAAATGGTTAATTGACACAGGCGGTTCTTACGATGAAAAAATATTTAGTATTGG
ACAAAATGTTGTAGTGCCTTTTCTACGTCAGCAAGGCGTAAGACAATTAGATCATGTTGTGCTATCCCATCTTGATCAAG
ACCATAGTGGCGCGTTTCCTCTTATTCAACAAGAGATTCCTGTAAAGCAGCTTATTTCGAATGAACAATTACCAAATGAT
TTAAAGCAACCATTCCAATATTGCCATCAAGGGCAACAATGGCATTATCCTGAGTTAGATATTCAAATTTTATGGCCTAA
AGAAAAAGATCTGGCTTTTGTTGCTTCTAACCAGAATCAATATTCTTGTGTTGTATATCTTCAATTTAAAAAAGTTGCTG
GTTACCAAAATTTTCTTATTATGGGCGATGCAGGATGGGAAGCTGAATACGAGTTATTAAAAGATTATCCTAACTTGAAG
ATAGATGTGTTAGTGCTAGGGCATCATGGAAGTAAGCACAGTTCGGCTTATGATTTCTTGGCGACCTTAAAACCTAAACT
GGCCATTGCATCGGCAGGGTTTGATAACCGTTATGGCCATCCTAGCCAACAAGTTATAGCACGTTTAAAAGCTCTACATA
TTCCGCTAAAAAGCACTGTGGAACAAGGGACCTTAAGTTTTGTGTTGGAAAACCACAAAATAGTTTTACATGACCGACGT
TTGGATCGGCTCTGGCTGAGTAGAGGTTTTTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-639)

• Competence protein (Competence) (243-521)

• Domain of unknown function (DUF4131) (DUF4131) (33-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	97.531	100	0.975
comA/comEC	Acinetobacter baumannii strain A118	96.914	100	0.969
comA/comEC	Acinetobacter baylyi ADP1	50.062	100	0.501