Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LOZ98_RS03460 Genome accession   NZ_CP087328
Coordinates   695740..696123 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain OC074     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 690740..701123
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LOZ98_RS03450 - 693641..694759 (-) 1119 WP_001260815.1 efflux RND transporter periplasmic adaptor subunit -
  LOZ98_RS03455 - 694819..695457 (-) 639 WP_004739833.1 hypothetical protein -
  LOZ98_RS03460 pilG 695740..696123 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  LOZ98_RS03465 - 696147..696509 (+) 363 WP_000101096.1 PleD family two-component system response regulator -
  LOZ98_RS03470 - 696570..697106 (+) 537 WP_000729759.1 chemotaxis protein CheW -
  LOZ98_RS03475 - 697153..697473 (+) 321 Protein_665 chemotaxis protein -
  LOZ98_RS03480 dapE 697512..698648 (-) 1137 WP_001016581.1 succinyl-diaminopimelate desuccinylase -
  LOZ98_RS03485 - 698774..698917 (-) 144 WP_001984826.1 entericidin A/B family lipoprotein -
  LOZ98_RS03490 - 699016..699924 (-) 909 WP_119047961.1 DUF1853 family protein -
  LOZ98_RS03495 - 700029..700397 (+) 369 WP_001259501.1 YbaN family protein -
  LOZ98_RS03500 elsL 700548..701051 (+) 504 WP_000077299.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=628781 LOZ98_RS03460 WP_000389061.1 695740..696123(+) (pilG) [Acinetobacter baumannii strain OC074]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=628781 LOZ98_RS03460 WP_000389061.1 695740..696123(+) (pilG) [Acinetobacter baumannii strain OC074]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTTATTGATGACTCAAAAACTATACGCCGTACCGCAGAAACTCTATT
GCAACGCGAAGGTTGCGAAGTGATTACTGCTGTCGATGGATTTGAAGCTTTATCTAAAATTGCTGAAGCGAATCCGGATA
TTGTTTTTGTAGATATCATGATGCCTCGTTTAGACGGTTATCAAACTTGTGCTTTGATTAAGAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGCTAAATGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37