Detailed information NTG0626519

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: N2A93_RS04365
• Genome accession: NZ_CP104046
• Coordinates: 831266..832495 (+)
• Length: 409 a.a.
• NCBI ID: WP_003103169.1
• Uniprot ID: A0ABP2T091
• Organism: Streptococcus parauberis strain KSP14
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 826266..837495

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N2A93_RS04345 (N2A93_04345)	-	826992..828275 (-)	1284	WP_003106609.1	hydroxymethylglutaryl-CoA reductase, degradative	-
N2A93_RS04350 (N2A93_04350)	-	828272..829438 (-)	1167	WP_003104825.1	hydroxymethylglutaryl-CoA synthase	-
N2A93_RS04355 (N2A93_04355)	-	829630..830469 (+)	840	WP_003106617.1	thymidylate synthase	-
N2A93_RS04360 (N2A93_04360)	-	830546..831061 (+)	516	WP_003106618.1	dihydrofolate reductase	-
N2A93_RS04365 (N2A93_04365)	clpX	831266..832495 (+)	1230	WP_003103169.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
N2A93_RS04370 (N2A93_04370)	yihA	832504..833103 (+)	600	WP_003106619.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
N2A93_RS04375 (N2A93_04375)	-	833268..833933 (+)	666	WP_003106620.1	hypothetical protein	-
N2A93_RS04380 (N2A93_04380)	clpC	833956..836064 (-)	2109	WP_003105519.1	AAA family ATPase	Regulator
N2A93_RS04385 (N2A93_04385)	rplJ	836515..837015 (+)	501	WP_003104757.1	50S ribosomal protein L10	-
N2A93_RS04390 (N2A93_04390)	rplL	837081..837446 (+)	366	WP_003103838.1	50S ribosomal protein L7/L12	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45058.55 Da
• Isoelectric Point: 4.4670

>NTDB_id=626519 N2A93_RS04365 WP_003103169.1 831266..832495(+) (clpX) [Streptococcus parauberis strain KSP14]
MASNRSNEIKVHCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLEALNQYVVGQDR
AKRALAVAVYNHYKRISYKESRDEEEVELQKSNIMMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENMSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQSSRKIDDEASYMQEIIAEDIQKFGLIPEFIGRLPVVAALEQLSIGDLIQI
LTEPKNALVKQYQALLSYDGVELEFNQEALEAIASKAIDRNTGARGLRSIIEETMLDIMFDIPSQEDITKVIITKEAVSG
DSKPILETA

Nucleotide

• Length: 1230 bp

>NTDB_id=626519 N2A93_RS04365 WP_003103169.1 831266..832495(+) (clpX) [Streptococcus parauberis strain KSP14]
ATGGCAAGTAATCGTAGTAACGAAATCAAGGTTCATTGTTCGTTTTGTGGCAAGAGCCAAGATGAAGTAAAAAAAATTAT
TGCAGGTAACAATGTATTCATTTGTAATGAGTGTGTTGCTTTATCACAAGAAATTATTAAAGAAGAATTAGCTGAAGAAG
TCTTGGCTGATTTGACTGAAGTTCCAAAACCAAAAGAACTTTTAGAAGCTTTAAATCAATATGTAGTCGGTCAAGATCGT
GCTAAACGTGCCTTAGCTGTTGCAGTCTATAATCATTACAAACGGATTTCATATAAAGAAAGCCGTGATGAAGAAGAAGT
GGAACTCCAAAAATCAAATATCATGATGATTGGTCCTACTGGTTCTGGTAAGACTTTCCTAGCTCAAACCTTGGCAAAAA
GCTTAAATGTTCCTTTTGCAATCGCTGACGCTACATCTTTGACAGAAGCTGGATATGTAGGTGAAGACGTTGAGAACATT
CTTTTAAAACTGATCCAAGCAGCGGATTACAATGTTGAACGAGCTGAGCGTGGGATCATTTATGTTGATGAGATTGATAA
AATCGCTAAAAAAGGCGAAAATATGTCAATCACTCGTGATGTTTCAGGTGAAGGTGTCCAACAAGCTTTGCTGAAAATTA
TTGAAGGTACAGTAGCTAGTGTTCCACCACAAGGTGGACGCAAACATCCTAACCAAGAAATGATTCAAATCGATACCAAG
AATATTTTGTTTATCGTTGGTGGTGCTTTTGATGGCATTGAAGAAATTGTTAAACAACGTCTTGGTGAAAAGATTATTGG
TTTTGGTCAAAGTAGTCGTAAGATTGATGATGAAGCCTCATATATGCAAGAAATTATTGCTGAAGATATTCAAAAATTTG
GTTTAATTCCCGAATTTATTGGGCGTTTACCTGTCGTAGCCGCTTTGGAACAGTTATCAATTGGCGATTTAATTCAGATT
CTGACTGAACCAAAAAATGCCTTGGTCAAACAATATCAAGCTTTATTATCATATGATGGTGTTGAACTTGAATTTAATCA
AGAAGCTCTTGAAGCCATTGCTTCAAAAGCGATAGACCGTAATACTGGTGCGCGTGGTTTAAGATCAATTATTGAAGAAA
CCATGTTAGATATCATGTTTGATATACCTAGCCAGGAAGATATTACTAAGGTAATTATTACAAAAGAAGCCGTTTCTGGA
GATAGTAAACCTATCTTAGAAACTGCATAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	86.797	100	0.868
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.359	98.044	0.553