Detailed information NTG0626449

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: MRX62_RS09085
• Genome accession: NZ_CP104027
• Coordinates: 1898141..1899286 (-)
• Length: 381 a.a.
• NCBI ID: WP_031337011.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. pauca strain 50088
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1893141..1904286

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MRX62_RS09070 (MRX62_09075)	-	1893490..1894053 (-)	564	WP_010893439.1	Sua5/YciO/YrdC/YwlC family protein	-
MRX62_RS09075 (MRX62_09080)	-	1894167..1896614 (-)	2448	WP_010893440.1	DNA topoisomerase I	-
MRX62_RS09080 (MRX62_09085)	-	1897622..1898095 (-)	474	WP_010893443.1	DUF494 family protein	-
MRX62_RS09085 (MRX62_09090)	dprA	1898141..1899286 (-)	1146	WP_031337011.1	DNA-processing protein DprA	Machinery gene
MRX62_RS09090 (MRX62_09095)	-	1899377..1900531 (-)	1155	WP_031337010.1	LysM peptidoglycan-binding domain-containing protein	-
MRX62_RS09095 (MRX62_09100)	def	1900670..1901182 (+)	513	WP_004089639.1	peptide deformylase	-
MRX62_RS09100 (MRX62_09105)	fmt	1901288..1902211 (+)	924	WP_023906923.1	methionyl-tRNA formyltransferase	-
MRX62_RS09105 (MRX62_09110)	rsmB	1902208..1903497 (+)	1290	WP_023906922.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40383.11 Da
• Isoelectric Point: 8.0177

>NTDB_id=626449 MRX62_RS09085 WP_031337011.1 1898141..1899286(-) (dprA) [Xylella fastidiosa subsp. pauca strain 50088]
MASPSHSDSQDTDALLRLVLAGGRSAPRRQLLDYHGTPHAALAAGPNAWRASGCNTMQCTRLVAPDPNAMARIQHWLATP
YHHLLGWHDPDYPPLLRHVPSPPLALFIAGNPILLWHASIAIVGSRQPSAGGLDHSYGFAQALAARGLGIISGMAAGIDA
TAHEAALSIPSGHTVAVLGTGPDVPYPARHKKLYARITTDGAVISEYPPGTQPRAGHFPQRNRIIAGLALGTLVIEAGAR
SGALITARLAAEAGRAVFAVPGSLHNPMTRGCHQLIRQGATLVQDIDQILEDVATLAAPLAHTLRERLDAPSWPVAPSLS
TPNSNDPKYHTLWQALAHDPMSMDSLIERTGLTAATLSSMLLTLELEGKVVVEHGRYTRTA

Nucleotide

• Length: 1146 bp

>NTDB_id=626449 MRX62_RS09085 WP_031337011.1 1898141..1899286(-) (dprA) [Xylella fastidiosa subsp. pauca strain 50088]
ATGGCATCCCCATCCCACTCAGACTCCCAAGACACGGACGCGCTGCTACGACTGGTCCTCGCCGGAGGCAGAAGCGCACC
GCGGCGCCAACTACTGGATTACCACGGCACACCACACGCCGCATTGGCCGCCGGTCCAAATGCTTGGCGAGCCAGTGGCT
GTAACACAATGCAGTGCACCCGCCTAGTTGCTCCCGATCCCAATGCAATGGCACGCATACAACACTGGTTGGCAACGCCT
TACCATCACCTGCTCGGTTGGCACGATCCGGATTACCCGCCATTACTGCGTCATGTCCCTTCGCCACCCTTAGCATTGTT
CATCGCAGGAAATCCAATACTGCTATGGCACGCCAGTATTGCCATCGTCGGCAGCCGCCAGCCCAGTGCAGGCGGCCTTG
ATCATTCCTATGGCTTCGCACAGGCATTAGCGGCACGCGGCCTGGGTATCATCAGCGGAATGGCAGCCGGAATCGACGCT
ACAGCACACGAAGCCGCACTCAGCATACCCAGTGGGCATACGGTCGCAGTCCTTGGTACGGGCCCGGATGTGCCATACCC
AGCACGTCACAAAAAACTGTACGCACGTATCACCACAGACGGAGCGGTCATCAGCGAATATCCACCAGGAACCCAACCAC
GGGCCGGCCACTTTCCACAACGCAACAGAATTATTGCAGGCTTGGCGCTGGGCACACTGGTGATCGAAGCTGGAGCGCGT
TCCGGCGCACTGATCACCGCTCGACTGGCAGCAGAAGCAGGGCGTGCGGTATTCGCAGTGCCAGGATCGCTACACAACCC
TATGACACGCGGCTGCCACCAGTTGATCCGTCAAGGCGCAACCCTGGTTCAAGACATAGACCAAATATTGGAGGACGTCG
CTACACTAGCCGCGCCGTTGGCACACACCTTGCGTGAGCGCCTTGATGCTCCCAGTTGGCCTGTAGCGCCATCGTTAAGC
ACACCAAACAGTAACGACCCTAAATACCACACACTCTGGCAGGCCCTTGCACATGACCCAATGTCTATGGACTCATTAAT
TGAACGTACTGGATTGACGGCAGCCACACTCTCCTCCATGCTTCTAACGTTGGAACTGGAAGGAAAGGTTGTCGTAGAAC
ACGGACGTTATACACGTACCGCTTAA

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (320-375)

• DNA recombination-mediator protein A (DNA_processg_A) (83-284)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Acinetobacter baumannii D1279779	37.197	97.375	0.362
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	40.469	89.501	0.362
dprA	Vibrio cholerae strain A1552	40.469	89.501	0.362