Detailed information NTG0626286

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LJN47_RS02565
• Genome accession: NZ_CP086760
• Coordinates: 539507..540307 (+)
• Length: 266 a.a.
• NCBI ID: WP_229930041.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 3192
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 534507..545307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LJN47_RS02530 (LJN47_02530)	pseH	535006..535548 (+)	543	WP_220873960.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
LJN47_RS02535 (LJN47_02535)	-	535481..536419 (-)	939	WP_229930038.1	tetraacyldisaccharide 4'-kinase	-
LJN47_RS02540 (LJN47_02540)	-	536416..537198 (-)	783	WP_229930039.1	NAD+ synthase	-
LJN47_RS02550 (LJN47_02550)	ilvC	537447..538439 (+)	993	WP_229930040.1	ketol-acid reductoisomerase	-
LJN47_RS02555 (LJN47_02555)	minD	538464..539270 (+)	807	WP_075707746.1	septum site-determining protein MinD	-
LJN47_RS02560 (LJN47_02560)	minE	539267..539500 (+)	234	WP_000051425.1	cell division topological specificity factor MinE	-
LJN47_RS02565 (LJN47_02565)	dprA	539507..540307 (+)	801	WP_229930041.1	DNA-processing protein DprA	Machinery gene
LJN47_RS02570 (LJN47_02570)	dprB	540304..540708 (+)	405	WP_229930042.1	Holliday junction resolvase RuvX	Machinery gene
LJN47_RS02575 (LJN47_02575)	-	540989..541456 (+)	468	WP_220946841.1	tetratricopeptide repeat protein	-
LJN47_RS02580 (LJN47_02580)	-	541642..541980 (+)	339	WP_140547863.1	hypothetical protein	-
LJN47_RS02585 (LJN47_02585)	-	541964..542524 (+)	561	WP_127977393.1	hypothetical protein	-
LJN47_RS02590 (LJN47_02590)	-	542637..543518 (-)	882	WP_229930043.1	RluA family pseudouridine synthase	-
LJN47_RS02595 (LJN47_02595)	recJ	543518..545068 (-)	1551	WP_229930044.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29865.76 Da
• Isoelectric Point: 8.2264

>NTDB_id=626286 LJN47_RS02565 WP_229930041.1 539507..540307(+) (dprA) [Helicobacter pylori strain 3192]
MKSHFQYSALENIPKAFDILKNPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMEDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=626286 LJN47_RS02565 WP_229930041.1 539507..540307(+) (dprA) [Helicobacter pylori strain 3192]
ATGAAAAGCCATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAAACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCACCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTACCCCAACGCCTGAATGAAAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGGAAGATGAATTTTTAGAATATTGTGCGAAAAACCCAAGCTATGAAGAAGCGTAT
CTTAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	98.12	100	0.981
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414