Detailed information NTG0624816

Bioinformatically predicted

Overview

• Name: ssb
• Type: Machinery gene
• Locus tag: LMJ46_RS00370
• Genome accession: NZ_CP086411
• Coordinates: 75975..76502 (+)
• Length: 175 a.a.
• NCBI ID: WP_010826244.1
• Uniprot ID: -
• Organism: Enterococcus faecalis strain R5
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 70975..81502

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LMJ46_RS00330 (LMJ46_00330)	-	71194..71379 (+)	186	WP_002364665.1	hypothetical protein	-
LMJ46_RS00335 (LMJ46_00335)	-	71391..71567 (+)	177	WP_010711635.1	hypothetical protein	-
LMJ46_RS00340 (LMJ46_00340)	-	71707..72267 (-)	561	WP_064687099.1	hypothetical protein	-
LMJ46_RS00345 (LMJ46_00345)	-	72552..73295 (+)	744	WP_010708942.1	ERF family protein	-
LMJ46_RS00350 (LMJ46_00350)	-	73295..74233 (+)	939	WP_010783683.1	DUF1351 domain-containing protein	-
LMJ46_RS00355 (LMJ46_00355)	-	74230..74871 (+)	642	WP_229017981.1	putative HNHc nuclease	-
LMJ46_RS00360 (LMJ46_00360)	-	74875..75672 (+)	798	WP_010784194.1	helix-turn-helix domain-containing protein	-
LMJ46_RS00365 (LMJ46_00365)	-	75677..75985 (+)	309	WP_010822654.1	MazG-like family protein	-
LMJ46_RS00370 (LMJ46_00370)	ssb	75975..76502 (+)	528	WP_010826244.1	single-stranded DNA-binding protein	Machinery gene
LMJ46_RS00375 (LMJ46_00375)	-	76515..76844 (+)	330	WP_049097668.1	hypothetical protein	-
LMJ46_RS00380 (LMJ46_00380)	-	76864..77070 (+)	207	WP_002395701.1	hypothetical protein	-
LMJ46_RS00385 (LMJ46_00385)	-	77123..77863 (+)	741	WP_002410993.1	hypothetical protein	-
LMJ46_RS00390 (LMJ46_00390)	-	77881..78555 (+)	675	WP_229017982.1	N-6 DNA methylase	-
LMJ46_RS00395 (LMJ46_00395)	-	78569..79513 (+)	945	WP_229017983.1	site-specific integrase	-
LMJ46_RS00400 (LMJ46_00400)	-	79526..80098 (+)	573	WP_229017984.1	hypothetical protein	-
LMJ46_RS00405 (LMJ46_00405)	-	80082..80462 (+)	381	WP_010731652.1	YopX family protein	-
LMJ46_RS00410 (LMJ46_00410)	-	80463..80795 (+)	333	WP_229017985.1	hypothetical protein	-
LMJ46_RS00415 (LMJ46_00415)	-	80796..81074 (+)	279	WP_229017986.1	hypothetical protein	-
LMJ46_RS00420 (LMJ46_00420)	-	81086..81382 (+)	297	WP_192190748.1	DNA-directed RNA polymerase subunit delta	-

Sequence

Protein

• Length: 175 a.a.
• Molecular weight: 19235.07 Da
• Isoelectric Point: 4.7078

>NTDB_id=624816 LMJ46_RS00370 WP_010826244.1 75975..76502(+) (ssb) [Enterococcus faecalis strain R5]
MINNVVLVGRLTKDPDLRYTASGSAVGSFTLAVNRNFTNQNGEREADFINCVIWRKPAETMANYARKGTLLGVVGRIQTR
NYDNQQGQRVYVTEVVCESFQLLEAKSANENRNSIQSSQNSVTGVQNNFESNYAANQNKGLNQQNNSQQISFGGDVDPFA
GAGNSIDISDDDLPF

Nucleotide

• Length: 528 bp

>NTDB_id=624816 LMJ46_RS00370 WP_010826244.1 75975..76502(+) (ssb) [Enterococcus faecalis strain R5]
ATGATAAATAATGTGGTATTAGTCGGAAGATTGACAAAAGATCCTGATTTACGCTACACCGCAAGTGGTTCTGCAGTTGG
AAGCTTTACTCTTGCTGTGAACCGTAACTTTACAAACCAAAACGGCGAACGAGAAGCGGATTTTATCAACTGTGTAATTT
GGCGTAAGCCTGCTGAAACAATGGCTAATTATGCTCGTAAAGGAACATTATTAGGAGTTGTTGGCAGAATTCAAACTCGT
AATTATGACAACCAACAAGGCCAACGTGTCTATGTGACTGAAGTTGTTTGCGAGAGTTTCCAATTATTAGAGGCAAAAAG
CGCCAATGAGAATAGAAATAGCATTCAGAGTTCACAGAATAGCGTTACAGGCGTTCAAAATAATTTCGAGAGTAATTATG
CTGCGAATCAAAACAAAGGCTTAAATCAGCAAAATAACAGCCAACAAATATCGTTTGGTGGAGATGTAGATCCGTTCGCA
GGTGCAGGTAATTCAATCGACATTAGCGATGATGATCTGCCGTTCTAG

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssb	Latilactobacillus sakei subsp. sakei 23K	58.989	100	0.6
ssbA	Bacillus subtilis subsp. subtilis str. 168	57.303	100	0.583
ssbB	Bacillus subtilis subsp. subtilis str. 168	59.434	60.571	0.36