Detailed information NTG0062389

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: FNP71_RS15175
• Genome accession: NZ_AP019714
• Coordinates: 2831466..2832071 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. subtilis strain NBRC 13719
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2826466..2837071

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNP71_RS15145 (NBRC13719_28620)	-	2827279..2827668 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
FNP71_RS15150 (NBRC13719_28630)	yajC	2827725..2827991 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
FNP71_RS15155 (NBRC13719_28640)	tgt	2828028..2829173 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
FNP71_RS15160 (NBRC13719_28650)	queA	2829200..2830228 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
FNP71_RS15165 (NBRC13719_28660)	yrzS	2830258..2830458 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
FNP71_RS15170 (NBRC13719_28670)	ruvB	2830451..2831455 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
FNP71_RS15175 (NBRC13719_28680)	ruvA	2831466..2832071 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
FNP71_RS15180 (NBRC13719_28690)	bofC	2832210..2832722 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
FNP71_RS15185 (NBRC13719_28700)	csbX	2832770..2834077 (-)	1308	WP_003246197.1	MFS transporter	-
FNP71_RS15190 (NBRC13719_28710)	iolG	2834148..2835173 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
FNP71_RS15195 (NBRC13719_28720)	yrzF	2835411..2836058 (+)	648	WP_003246159.1	phosphotransferase	-
FNP71_RS15200 (NBRC13719_28730)	-	2836104..2836226 (-)	123	WP_003229707.1	hypothetical protein	-
FNP71_RS15205 (NBRC13719_28740)	yrzH	2836311..2836601 (+)	291	WP_003246047.1	DUF5412 family protein	-
FNP71_RS15210	-	2836608..2836748 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=62389 FNP71_RS15175 WP_003229717.1 2831466..2832071(-) (ruvA) [Bacillus subtilis subsp. subtilis strain NBRC 13719]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=62389 FNP71_RS15175 WP_003229717.1 2831466..2832071(-) (ruvA) [Bacillus subtilis subsp. subtilis strain NBRC 13719]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408