Detailed information NTG0623600

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: LL975_RS05690
• Genome accession: NZ_CP086198
• Coordinates: 1082685..1083191 (+)
• Length: 168 a.a.
• NCBI ID: WP_269886991.1
• Uniprot ID: -
• Organism: Macrococcoides canis strain KW0150
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1077685..1088191

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LL975_RS05655 (LL975_05635)	recT	1078413..1079243 (+)	831	WP_133452842.1	recombination protein RecT	-
LL975_RS05660 (LL975_05640)	-	1079259..1079618 (-)	360	WP_269886985.1	hypothetical protein	-
LL975_RS05665 (LL975_05645)	-	1079671..1080426 (+)	756	WP_269886986.1	HNH endonuclease	-
LL975_RS05670 (LL975_05650)	-	1080423..1081310 (+)	888	WP_269886987.1	DnaD domain-containing protein	-
LL975_RS05675 (LL975_05655)	-	1081288..1082073 (+)	786	WP_269886988.1	ATP-binding protein	-
LL975_RS05680 (LL975_05660)	-	1082191..1082367 (+)	177	WP_269886989.1	hypothetical protein	-
LL975_RS05685 (LL975_05665)	-	1082512..1082688 (+)	177	WP_269886990.1	hypothetical protein	-
LL975_RS05690 (LL975_05670)	ssbA	1082685..1083191 (+)	507	WP_269886991.1	single-stranded DNA-binding protein	Machinery gene
LL975_RS05695 (LL975_05675)	-	1083207..1083740 (+)	534	WP_269886992.1	methyltransferase domain-containing protein	-
LL975_RS05700 (LL975_05680)	-	1083819..1084085 (+)	267	WP_269886993.1	hypothetical protein	-
LL975_RS05705 (LL975_05685)	-	1084094..1084315 (+)	222	WP_269886994.1	hypothetical protein	-
LL975_RS05710 (LL975_05690)	-	1084312..1084491 (+)	180	WP_269886995.1	hypothetical protein	-
LL975_RS05715 (LL975_05695)	-	1084504..1084896 (+)	393	WP_269886996.1	hypothetical protein	-
LL975_RS05720 (LL975_05700)	-	1084899..1085126 (+)	228	WP_269886998.1	helix-turn-helix domain-containing protein	-
LL975_RS05725 (LL975_05705)	-	1085129..1086385 (+)	1257	WP_269886999.1	DUF3310 domain-containing protein	-
LL975_RS05730 (LL975_05710)	-	1086382..1086651 (+)	270	WP_269887000.1	hypothetical protein	-
LL975_RS05735 (LL975_05715)	-	1086676..1086903 (+)	228	WP_269887001.1	hypothetical protein	-
LL975_RS05740 (LL975_05720)	-	1086935..1087159 (+)	225	WP_269887002.1	hypothetical protein	-
LL975_RS05745 (LL975_05725)	-	1087172..1087408 (+)	237	WP_269887003.1	hypothetical protein	-
LL975_RS05750 (LL975_05730)	-	1087399..1087602 (+)	204	WP_269887004.1	hypothetical protein	-
LL975_RS05755 (LL975_05735)	-	1087833..1088126 (+)	294	WP_269887005.1	hypothetical protein	-

Sequence

Protein

• Length: 168 a.a.
• Molecular weight: 18915.63 Da
• Isoelectric Point: 5.1576

>NTDB_id=623600 LL975_RS05690 WP_269886991.1 1082685..1083191(+) (ssbA) [Macrococcoides canis strain KW0150]
MINRVVLTGRLTKDPEFRVTPSGVSVASFTLAVNRMFTNDQGERQADFINCVTFRKQAENVNNFLNKGSLVGVDGRLQSR
SYDNQQGQRVFVTEVICDSVQFLEPKNSQNQQNNGAQQTNYNQTNNNYQNNQNVNRGQNNANNGYTQKQDPFLNATGPID
ISDDDLPF

Nucleotide

• Length: 507 bp

>NTDB_id=623600 LL975_RS05690 WP_269886991.1 1082685..1083191(+) (ssbA) [Macrococcoides canis strain KW0150]
ATGATTAACAGAGTAGTGCTTACAGGTAGACTAACAAAGGATCCAGAATTCAGAGTAACGCCATCAGGTGTGTCAGTCGC
GTCATTCACACTAGCAGTAAATCGCATGTTTACGAATGACCAGGGAGAGCGTCAAGCAGACTTCATTAACTGTGTGACAT
TCCGTAAACAAGCGGAAAACGTTAACAACTTCTTAAATAAAGGTAGTCTAGTTGGTGTAGATGGAAGATTACAATCACGC
AGCTATGATAATCAACAAGGACAGCGTGTATTCGTTACAGAAGTGATTTGTGATAGCGTACAGTTTCTTGAGCCGAAGAA
TAGCCAAAATCAACAAAATAACGGCGCACAGCAAACAAATTACAATCAGACGAACAACAACTATCAAAATAATCAAAACG
TCAACAGAGGGCAAAATAATGCAAATAACGGATATACGCAGAAGCAAGATCCATTTTTAAATGCAACTGGACCTATTGAT
ATCAGTGATGATGATTTACCGTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	63.068	100	0.661
ssb	Latilactobacillus sakei subsp. sakei 23K	55.882	100	0.565
ssb	Glaesserella parasuis strain SC1401	36.464	100	0.393