Detailed information NTG0622212

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: LK685_RS19550
• Genome accession: NZ_CP086061
• Coordinates: 3739545..3740693 (-)
• Length: 382 a.a.
• NCBI ID: WP_024571686.1
• Uniprot ID: -
• Organism: Bacillus sp. BC1-43
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3734545..3745693

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LK685_RS19520 (LK685_19525)	yclO	3735264..3736211 (-)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-
LK685_RS19525 (LK685_19530)	ceuB	3736204..3737154 (-)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
LK685_RS19530 (LK685_19535)	-	3737538..3738902 (+)	1365	WP_229762521.1	aspartate kinase	-
LK685_RS19535 (LK685_19540)	-	3739055..3739168 (+)	114	WP_003234495.1	YjcZ family sporulation protein	-
LK685_RS19540 (LK685_19545)	-	3739250..3739339 (+)	90	WP_015482794.1	YjcZ family sporulation protein	-
LK685_RS19545 (LK685_19550)	phrC	3739439..3739561 (-)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
LK685_RS19550 (LK685_19555)	rapC	3739545..3740693 (-)	1149	WP_024571686.1	response regulator aspartate phosphatase RapC	Regulator
LK685_RS19555 (LK685_19560)	yclK	3740856..3742277 (-)	1422	WP_229762522.1	two-component system sensor histidine kinase YclK	-
LK685_RS19560 (LK685_19565)	yclJ	3742264..3742947 (-)	684	WP_003246532.1	two-component system response regulator YclJ	-
LK685_RS19565 (LK685_19570)	-	3743160..3744626 (+)	1467	WP_114523697.1	ABC transporter permease	-
LK685_RS19570 (LK685_19575)	-	3744642..3745322 (+)	681	WP_128740020.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45591.61 Da
• Isoelectric Point: 5.0364

>NTDB_id=622212 LK685_RS19550 WP_024571686.1 3739545..3740693(-) (rapC) [Bacillus sp. BC1-43]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLG
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=622212 LK685_RS19550 WP_024571686.1 3739545..3740693(-) (rapC) [Bacillus sp. BC1-43]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAATCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGGC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568