Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   LK685_RS19525 Genome accession   NZ_CP086061
Coordinates   3736204..3737154 (-) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus sp. BC1-43     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3731204..3742154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK685_RS19505 (LK685_19510) - 3732072..3733490 (+) 1419 WP_003246604.1 MDR family MFS transporter -
  LK685_RS19510 (LK685_19515) yclQ 3733537..3734490 (-) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  LK685_RS19515 (LK685_19520) yclP 3734512..3735270 (-) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  LK685_RS19520 (LK685_19525) yclO 3735264..3736211 (-) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  LK685_RS19525 (LK685_19530) ceuB 3736204..3737154 (-) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  LK685_RS19530 (LK685_19535) - 3737538..3738902 (+) 1365 WP_229762521.1 aspartate kinase -
  LK685_RS19535 (LK685_19540) - 3739055..3739168 (+) 114 WP_003234495.1 YjcZ family sporulation protein -
  LK685_RS19540 (LK685_19545) - 3739250..3739339 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  LK685_RS19545 (LK685_19550) phrC 3739439..3739561 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  LK685_RS19550 (LK685_19555) rapC 3739545..3740693 (-) 1149 WP_024571686.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=622210 LK685_RS19525 WP_003234491.1 3736204..3737154(-) (ceuB) [Bacillus sp. BC1-43]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=622210 LK685_RS19525 WP_003234491.1 3736204..3737154(-) (ceuB) [Bacillus sp. BC1-43]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522