Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | LK685_RS08585 | Genome accession | NZ_CP086061 |
| Coordinates | 1647009..1647305 (+) | Length | 98 a.a. |
| NCBI ID | WP_003230162.1 | Uniprot ID | A0A809FGR8 |
| Organism | Bacillus sp. BC1-43 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1642009..1652305
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LK685_RS08565 (LK685_08570) | - | 1642065..1643393 (-) | 1329 | WP_009967730.1 | hemolysin family protein | - |
| LK685_RS08570 (LK685_08575) | corA | 1643536..1644489 (+) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| LK685_RS08575 (LK685_08580) | comGA | 1644901..1645971 (+) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| LK685_RS08580 (LK685_08585) | comGB | 1645958..1646995 (+) | 1038 | WP_009967727.1 | comG operon protein ComGB | Machinery gene |
| LK685_RS08585 (LK685_08590) | comGC | 1647009..1647305 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| LK685_RS08590 (LK685_08595) | comGD | 1647295..1647726 (+) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| LK685_RS08595 (LK685_08600) | comGE | 1647710..1648057 (+) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| LK685_RS08600 (LK685_08605) | comGF | 1648083..1648466 (+) | 384 | WP_003230168.1 | ComG operon protein ComGF | Machinery gene |
| LK685_RS08605 (LK685_08610) | comGG | 1648467..1648841 (+) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| LK685_RS08610 (LK685_08615) | - | 1648912..1649091 (+) | 180 | WP_014480252.1 | YqzE family protein | - |
| LK685_RS08615 (LK685_08620) | - | 1649133..1649459 (-) | 327 | WP_024573388.1 | YqzG/YhdC family protein | - |
| LK685_RS08620 (LK685_08625) | tapA | 1649731..1650492 (+) | 762 | WP_229762707.1 | amyloid fiber anchoring/assembly protein TapA | - |
| LK685_RS08625 (LK685_08630) | - | 1650476..1651048 (+) | 573 | WP_003246088.1 | signal peptidase I | - |
| LK685_RS08630 (LK685_08635) | tasA | 1651112..1651897 (+) | 786 | WP_212058891.1 | TasA family protein | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 10849.74 Da Isoelectric Point: 6.7083
>NTDB_id=622174 LK685_RS08585 WP_003230162.1 1647009..1647305(+) (comGC) [Bacillus sp. BC1-43]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH
Nucleotide
Download Length: 297 bp
>NTDB_id=622174 LK685_RS08585 WP_003230162.1 1647009..1647305(+) (comGC) [Bacillus sp. BC1-43]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| comGC | Staphylococcus aureus MW2 |
41.304 |
93.878 |
0.388 |
| comGC | Staphylococcus aureus N315 |
41.304 |
93.878 |
0.388 |
| comYC | Streptococcus suis isolate S10 |
49.333 |
76.531 |
0.378 |