Detailed information NTG0622068

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: LKM46_RS22695
• Genome accession: NZ_CP086016
• Coordinates: 4734957..4737182 (-)
• Length: 741 a.a.
• NCBI ID: WP_058173609.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa isolate KB-PA_3
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4729957..4742182

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LKM46_RS22660 (LKM46_22660)	murB	4730347..4731366 (-)	1020	WP_042168960.1	UDP-N-acetylmuramate dehydrogenase	-
LKM46_RS22665 (LKM46_22665)	-	4731363..4731827 (-)	465	WP_003091154.1	low molecular weight protein-tyrosine-phosphatase	-
LKM46_RS22670 (LKM46_22670)	kdsB	4731827..4732591 (-)	765	WP_033968892.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
LKM46_RS22675 (LKM46_22675)	-	4732591..4732776 (-)	186	WP_003091157.1	Trm112 family protein	-
LKM46_RS22680 (LKM46_22680)	lpxK	4732814..4733812 (-)	999	WP_003091159.1	tetraacyldisaccharide 4'-kinase	-
LKM46_RS22685 (LKM46_22685)	-	4733812..4734252 (-)	441	WP_003091161.1	ExbD/TolR family protein	-
LKM46_RS22690 (LKM46_22690)	exbB	4734249..4734884 (-)	636	WP_003091163.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
LKM46_RS22695 (LKM46_22695)	comA	4734957..4737182 (-)	2226	WP_058173609.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LKM46_RS22700 (LKM46_22700)	-	4737313..4737846 (+)	534	WP_003091165.1	DUF2062 domain-containing protein	-
LKM46_RS22705 (LKM46_22705)	-	4737934..4739178 (-)	1245	WP_033968896.1	lipoprotein-releasing ABC transporter permease subunit	-
LKM46_RS22710 (LKM46_22710)	lolD	4739248..4739931 (-)	684	WP_003091168.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
LKM46_RS22715 (LKM46_22715)	-	4739924..4741174 (-)	1251	WP_003091170.1	lipoprotein-releasing ABC transporter permease subunit	-
LKM46_RS22720 (LKM46_22720)	-	4741277..4741876 (+)	600	WP_033975956.1	PilZ domain-containing protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 79911.51 Da
• Isoelectric Point: 9.9953

>NTDB_id=622068 LKM46_RS22695 WP_058173609.1 4734957..4737182(-) (comA) [Pseudomonas aeruginosa isolate KB-PA_3]
MRLGLPALAAGLLALRFLAELPSVGWLLGMAAAGLLLLFGRLYWLGLFLLGFAWACGSAQVALDGRLAAELDGRTLWLEG
RVVDLPASGEGITRFRLEEVSGARGVLLPERLRLSWRGAPPLMGGERWRLAVTLKRPRGLVNAAGFDYEAWLLGQRVGAV
GSVKAGQRLQPASGLDAWRDAWRQRLLAVDAQGRGAALAALVLGDGSGLSAAEWRMFQDTGTVHLMVISGSHISLLAGML
YGLVAALHRLGCWPRRLPWLPCACALGLLGAWSYGLMAGFEVPVRRACLMVSLALVWRLRFHHLGLLTPLLGTLVLVLLV
EPLASLQAGFWLSFLAVALLLWLFAGRLGRWRWWAAWGRAQWGMALGLAMPLLALGLPLSLSGALANLLAVPWIELLVVP
PALAGSLLLWVPGLGEGLLRAAGVSLDLLFRALGLLAGLAEAWQPPAAAAWSVALGMLGALCWLAPAGLPLRALGAVLLL
PALLPSSPPVEWGWAEVRMLDVGQGLAVLVRTREHALLYDSGARQGALDMGERVVVPVLRSLDLRRLDGLLLSHADSDHA
GGAPTVASRFPPGWLVSGEPARLPSPLFADSCDERSWSWDGVVFEQWAWAQAGDSNDRSCVLRVEADGEVLLLTGDMSRA
AEHAWLARQADPRVDWLLAPHHGSRSSSGVAFVLRTRPRHVLVSRGWRNAFGHPHGEVMERYARVAAQVHDTARDGALTF
LLGSRGGARRERDSAHFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=622068 LKM46_RS22695 WP_058173609.1 4734957..4737182(-) (comA) [Pseudomonas aeruginosa isolate KB-PA_3]
ATGCGCCTGGGATTGCCAGCCCTCGCCGCGGGGCTGCTGGCCCTGCGCTTCCTGGCGGAATTGCCGTCGGTCGGCTGGCT
GCTGGGCATGGCCGCCGCCGGACTGTTGCTGCTGTTCGGCCGGCTGTACTGGCTGGGCTTGTTCCTGCTCGGGTTCGCCT
GGGCCTGCGGCTCGGCGCAAGTCGCCCTGGACGGACGCCTGGCCGCCGAGCTGGATGGTCGCACCCTTTGGCTGGAGGGG
CGTGTGGTCGATCTGCCGGCGAGCGGCGAGGGCATCACGCGCTTCCGGCTGGAGGAGGTCAGTGGCGCGCGGGGCGTCCT
TCTTCCCGAGCGTCTGCGCCTGAGCTGGCGTGGTGCGCCGCCGCTGATGGGCGGCGAACGCTGGCGCCTGGCGGTGACCC
TGAAACGCCCTCGCGGCCTGGTGAACGCGGCGGGTTTCGACTACGAAGCCTGGTTGTTGGGGCAGCGGGTCGGTGCCGTT
GGATCGGTGAAGGCGGGCCAGCGCCTGCAGCCGGCCAGTGGCCTGGATGCCTGGCGCGACGCCTGGCGCCAGCGCCTCCT
GGCGGTCGACGCGCAGGGGCGCGGCGCCGCCCTGGCGGCGCTGGTGCTGGGGGATGGCTCTGGATTGAGCGCGGCCGAGT
GGCGCATGTTCCAGGACACCGGCACCGTGCATCTGATGGTCATCTCCGGTTCGCATATCTCGTTGCTGGCGGGGATGCTC
TATGGCCTGGTGGCGGCCTTGCATCGCCTGGGCTGCTGGCCGCGGCGCCTGCCCTGGCTGCCCTGTGCCTGCGCCCTGGG
TTTGCTTGGTGCCTGGAGCTACGGGTTGATGGCGGGCTTCGAGGTCCCGGTGCGGCGCGCCTGCCTGATGGTCAGCCTGG
CGCTGGTCTGGCGCCTGCGTTTCCACCACCTGGGCTTGCTGACCCCGCTGCTGGGAACGCTGGTGCTGGTCTTGCTGGTC
GAGCCGCTGGCCAGCCTGCAGGCGGGGTTCTGGCTGTCGTTCCTGGCGGTTGCCCTGCTGCTCTGGCTGTTCGCCGGGCG
CCTTGGGCGCTGGCGCTGGTGGGCGGCCTGGGGGCGTGCGCAGTGGGGGATGGCGCTGGGGCTGGCGATGCCGCTGCTGG
CGCTGGGCCTGCCGTTGAGCCTGAGCGGAGCGCTGGCCAACCTGCTGGCGGTACCTTGGATCGAACTGCTGGTAGTGCCC
CCGGCCCTGGCGGGGAGCCTGCTGCTGTGGGTACCCGGGCTGGGCGAGGGTCTGCTTCGCGCCGCTGGCGTTTCGCTGGA
CCTGCTGTTTCGTGCGCTTGGCCTGCTGGCGGGCCTGGCCGAGGCCTGGCAGCCACCCGCCGCAGCGGCCTGGAGCGTAG
CGCTGGGCATGCTCGGCGCGCTCTGCTGGCTGGCGCCGGCTGGCTTGCCGTTGCGTGCCCTCGGTGCCGTGTTGCTACTG
CCGGCGTTGTTGCCGTCATCGCCGCCTGTCGAATGGGGGTGGGCGGAAGTGCGGATGCTGGACGTCGGCCAGGGGCTGGC
CGTGCTGGTGCGTACCCGGGAGCATGCCTTGCTCTATGACAGCGGTGCGCGGCAGGGGGCATTAGACATGGGCGAGCGGG
TGGTGGTGCCGGTGCTGCGCAGCCTGGACTTGCGACGCCTGGACGGCCTGTTGCTGAGCCATGCCGACAGCGACCATGCA
GGCGGTGCTCCTACGGTCGCTTCCCGATTCCCGCCGGGTTGGCTGGTCAGCGGCGAACCCGCGCGCCTGCCTTCGCCGTT
GTTCGCGGACAGCTGCGACGAGCGGAGCTGGTCCTGGGATGGCGTGGTTTTCGAACAGTGGGCATGGGCGCAGGCCGGCG
ACAGCAACGACCGCTCCTGCGTGCTGAGGGTCGAGGCCGATGGCGAAGTCCTGCTGCTGACCGGGGACATGTCGCGTGCG
GCCGAGCATGCCTGGCTGGCGCGACAGGCCGATCCGCGGGTCGACTGGTTGCTGGCGCCGCACCACGGCAGCCGCAGCTC
CTCCGGAGTCGCCTTCGTGTTGCGTACGCGGCCTCGCCATGTGCTGGTCTCGCGAGGTTGGCGCAACGCCTTCGGCCATC
CCCATGGCGAAGTGATGGAGCGTTACGCGAGGGTCGCCGCGCAGGTCCACGACACGGCACGCGACGGTGCCCTGACGTTT
CTCCTCGGAAGCCGTGGCGGTGCACGCCGGGAGCGTGATTCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (21-168)

• Competence protein (Competence) (201-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-666)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	58.252	97.301	0.567
comA	Ralstonia pseudosolanacearum GMI1000	35.611	100	0.366