Detailed information
Bioinformatically predicted
Overview
| Name | comO | Type | Machinery gene |
| Locus tag | HIFGL_RS02830 | Genome accession | NC_022356 |
| Coordinates | 570020..570739 (+) | Length | 239 a.a. |
| NCBI ID | WP_021034776.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae KR494 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 565020..575739
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HIFGL_RS02810 (HifGL_000562) | - | 565958..566488 (-) | 531 | WP_021034773.1 | DsbE family thiol:disulfide interchange protein | - |
| HIFGL_RS02815 (HifGL_000563) | nrfE | 566488..568395 (-) | 1908 | WP_021034774.1 | heme lyase NrfEFG subunit NrfE | - |
| HIFGL_RS02820 (HifGL_000564) | suhB | 568505..569308 (-) | 804 | WP_005631453.1 | inositol-1-monophosphatase | - |
| HIFGL_RS02825 (HifGL_000565) | comN | 569508..570020 (+) | 513 | WP_041175282.1 | pilus assembly FimT family protein | Machinery gene |
| HIFGL_RS02830 (HifGL_000566) | comO | 570020..570739 (+) | 720 | WP_021034776.1 | PulJ/GspJ family protein | Machinery gene |
| HIFGL_RS02835 (HifGL_000567) | comP | 570736..571419 (+) | 684 | WP_021034777.1 | DUF2572 family protein | Machinery gene |
| HIFGL_RS02840 (HifGL_000568) | comQ | 571412..571699 (+) | 288 | WP_021034778.1 | DUF5374 domain-containing protein | Machinery gene |
| HIFGL_RS02845 (HifGL_000569) | recC | 571745..575125 (+) | 3381 | WP_021034779.1 | exodeoxyribonuclease V subunit gamma | - |
| HIFGL_RS02850 (HifGL_000570) | nrdR | 575180..575629 (+) | 450 | WP_021034780.1 | transcriptional regulator NrdR | - |
Sequence
Protein
Download Length: 239 a.a. Molecular weight: 26792.10 Da Isoelectric Point: 9.3691
>NTDB_id=62164 HIFGL_RS02830 WP_021034776.1 570020..570739(+) (comO) [Haemophilus influenzae KR494]
MMKTLLKGQTLLALMISLALSSLLLLSISHFYVQIQTQNQQMLLHLKLQAELQRTLQLIGKDLRRLGFRALNAKLTESNL
SLFELDEQGTAIFISQEDNAPPNSCVLFFYDLNKNGCIGKGSPKTCMKNGKNTSKSSTEELFGYKVSNKMIKTKLTYQSV
IPTNCTAETCKRAFQQTACNAGGGWADLLDNNEYEITKLQFNWLIEGKGLEIKLKGNLKQAPNISYETSLVVALWNQKQ
MMKTLLKGQTLLALMISLALSSLLLLSISHFYVQIQTQNQQMLLHLKLQAELQRTLQLIGKDLRRLGFRALNAKLTESNL
SLFELDEQGTAIFISQEDNAPPNSCVLFFYDLNKNGCIGKGSPKTCMKNGKNTSKSSTEELFGYKVSNKMIKTKLTYQSV
IPTNCTAETCKRAFQQTACNAGGGWADLLDNNEYEITKLQFNWLIEGKGLEIKLKGNLKQAPNISYETSLVVALWNQKQ
Nucleotide
Download Length: 720 bp
>NTDB_id=62164 HIFGL_RS02830 WP_021034776.1 570020..570739(+) (comO) [Haemophilus influenzae KR494]
ATGATGAAAACATTATTAAAAGGGCAAACCCTATTAGCACTGATGATTTCACTGGCTTTGTCTTCTTTATTGCTGCTAAG
CATTTCGCATTTTTATGTGCAAATACAAACACAAAACCAACAAATGTTATTACATTTAAAATTACAAGCTGAATTACAAC
GAACATTACAGTTAATAGGTAAAGATCTTCGCCGATTAGGATTTCGAGCATTAAATGCAAAACTGACGGAAAGCAATTTA
TCTTTATTTGAATTAGATGAACAAGGCACAGCCATTTTCATTAGCCAAGAAGATAACGCCCCACCTAATAGCTGCGTGTT
GTTCTTTTATGATTTAAATAAAAATGGGTGTATTGGCAAAGGTTCGCCGAAAACCTGTATGAAAAATGGGAAAAATACAT
CTAAAAGTAGTACTGAAGAATTATTCGGCTATAAAGTGAGTAACAAAATGATAAAAACCAAACTGACTTATCAAAGTGTT
ATTCCTACTAATTGCACGGCAGAAACTTGTAAACGTGCTTTTCAACAAACCGCTTGCAACGCTGGGGGAGGTTGGGCAGA
TTTATTAGATAACAACGAATATGAAATCACTAAGCTACAATTTAATTGGTTAATCGAAGGAAAAGGATTAGAAATCAAGC
TAAAAGGAAATTTAAAACAAGCTCCAAATATTAGTTATGAAACATCCCTTGTCGTTGCTCTCTGGAATCAAAAACAATGA
ATGATGAAAACATTATTAAAAGGGCAAACCCTATTAGCACTGATGATTTCACTGGCTTTGTCTTCTTTATTGCTGCTAAG
CATTTCGCATTTTTATGTGCAAATACAAACACAAAACCAACAAATGTTATTACATTTAAAATTACAAGCTGAATTACAAC
GAACATTACAGTTAATAGGTAAAGATCTTCGCCGATTAGGATTTCGAGCATTAAATGCAAAACTGACGGAAAGCAATTTA
TCTTTATTTGAATTAGATGAACAAGGCACAGCCATTTTCATTAGCCAAGAAGATAACGCCCCACCTAATAGCTGCGTGTT
GTTCTTTTATGATTTAAATAAAAATGGGTGTATTGGCAAAGGTTCGCCGAAAACCTGTATGAAAAATGGGAAAAATACAT
CTAAAAGTAGTACTGAAGAATTATTCGGCTATAAAGTGAGTAACAAAATGATAAAAACCAAACTGACTTATCAAAGTGTT
ATTCCTACTAATTGCACGGCAGAAACTTGTAAACGTGCTTTTCAACAAACCGCTTGCAACGCTGGGGGAGGTTGGGCAGA
TTTATTAGATAACAACGAATATGAAATCACTAAGCTACAATTTAATTGGTTAATCGAAGGAAAAGGATTAGAAATCAAGC
TAAAAGGAAATTTAAAACAAGCTCCAAATATTAGTTATGAAACATCCCTTGTCGTTGCTCTCTGGAATCAAAAACAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comO | Haemophilus influenzae Rd KW20 |
97.059 |
99.582 |
0.967 |