Detailed information NTG0621281

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LK454_RS00215
• Genome accession: NZ_CP085923
• Coordinates: 38893..39693 (+)
• Length: 266 a.a.
• NCBI ID: WP_000841136.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain FDAARGOS_1601
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 33893..44693

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LK454_RS00180 (LK454_00180)	pseH	34388..34930 (+)	543	WP_000742657.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
LK454_RS00185 (LK454_00185)	-	34863..35801 (-)	939	WP_000833915.1	tetraacyldisaccharide 4'-kinase	-
LK454_RS00190 (LK454_00190)	-	35798..36580 (-)	783	WP_001168280.1	NAD+ synthase	-
LK454_RS00200 (LK454_00200)	ilvC	36829..37821 (+)	993	WP_001207770.1	ketol-acid reductoisomerase	-
LK454_RS00205 (LK454_00205)	minD	37845..38651 (+)	807	WP_054833651.1	septum site-determining protein MinD	-
LK454_RS00210 (LK454_00210)	minE	38648..38881 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
LK454_RS00215 (LK454_00215)	dprA	38893..39693 (+)	801	WP_000841136.1	DNA-processing protein DprA	Machinery gene
LK454_RS00220 (LK454_00220)	dprB	39690..40094 (+)	405	WP_000599144.1	Holliday junction resolvase RuvX	Machinery gene
LK454_RS00225 (LK454_00225)	-	40321..40992 (+)	672	WP_189394268.1	tetratricopeptide repeat protein	-
LK454_RS00230 (LK454_00230)	-	41107..41445 (+)	339	WP_000699883.1	hypothetical protein	-
LK454_RS00235 (LK454_00235)	-	41429..41989 (+)	561	WP_000038906.1	hypothetical protein	-
LK454_RS00240 (LK454_00240)	-	42019..42421 (+)	403	Protein_47	glycoside hydrolase family protein	-
LK454_RS00245 (LK454_00245)	-	42409..42675 (+)	267	WP_025444753.1	hypothetical protein	-
LK454_RS00250 (LK454_00250)	-	42978..43359 (+)	382	Protein_49	DUF1294 domain-containing protein	-
LK454_RS00255 (LK454_00255)	-	43359..44144 (+)	786	WP_000119822.1	hypothetical protein	-
LK454_RS00260 (LK454_00260)	-	44134..44358 (+)	225	WP_000426626.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29901.83 Da
• Isoelectric Point: 7.7746

>NTDB_id=621281 LK454_RS00215 WP_000841136.1 38893..39693(+) (dprA) [Helicobacter pylori strain FDAARGOS_1601]
MKSNFQYSVLENIHKAFDVLKDPPKKLYCVGDIKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNYKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMEDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=621281 LK454_RS00215 WP_000841136.1 38893..39693(+) (dprA) [Helicobacter pylori strain FDAARGOS_1601]
ATGAAGAGCAACTTCCAATACAGCGTGCTAGAGAATATCCATAAAGCCTTTGACGTGCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATATAAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGTGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAATTATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCTCAAAAATACCAAAAGCCCTTGTTTGTTTTACCCCAACGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGGAAGATGAATTTTTAGAATATTGCGCCAAAAATCCGAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (20-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414