Detailed information NTG0620980

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: NXS96_RS15065
• Genome accession: NZ_CP103066
• Coordinates: 2835793..2836398 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain 0137
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2830793..2841398

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NXS96_RS15035 (NXS96_15035)	-	2831606..2831995 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
NXS96_RS15040 (NXS96_15040)	yajC	2832052..2832318 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
NXS96_RS15045 (NXS96_15045)	tgt	2832355..2833500 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
NXS96_RS15050 (NXS96_15050)	queA	2833527..2834555 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
NXS96_RS15055 (NXS96_15055)	yrzS	2834585..2834785 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
NXS96_RS15060 (NXS96_15060)	ruvB	2834778..2835782 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
NXS96_RS15065 (NXS96_15065)	ruvA	2835793..2836398 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
NXS96_RS15070 (NXS96_15070)	bofC	2836537..2837049 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
NXS96_RS15075 (NXS96_15075)	csbX	2837097..2838404 (-)	1308	WP_003246197.1	MFS transporter	-
NXS96_RS15080 (NXS96_15080)	iolG	2838475..2839500 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
NXS96_RS15085 (NXS96_15085)	yrzF	2839738..2840385 (+)	648	WP_003246159.1	phosphotransferase	-
NXS96_RS15090 (NXS96_15090)	-	2840431..2840553 (-)	123	WP_003229707.1	hypothetical protein	-
NXS96_RS15095 (NXS96_15095)	-	2840533..2840928 (+)	396	WP_220096631.1	DUF5412 family protein	-
NXS96_RS15100 (NXS96_15100)	-	2840935..2841075 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=620980 NXS96_RS15065 WP_003229717.1 2835793..2836398(-) (ruvA) [Bacillus subtilis strain 0137]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=620980 NXS96_RS15065 WP_003229717.1 2835793..2836398(-) (ruvA) [Bacillus subtilis strain 0137]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408