Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   NW957_RS08165 Genome accession   NZ_CP102977
Coordinates   1712952..1714226 (+) Length   424 a.a.
NCBI ID   WP_165468770.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 27-G-H     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1707952..1719226
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW957_RS08145 (NW957_08145) - 1709276..1709371 (+) 96 WP_031761395.1 hypothetical protein -
  NW957_RS08150 (NW957_08150) - 1709332..1710462 (-) 1131 WP_072496642.1 HAD family hydrolase -
  NW957_RS08155 (NW957_08155) nagE 1710569..1712035 (-) 1467 WP_000276367.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  NW957_RS08160 (NW957_08160) - 1712163..1712780 (-) 618 WP_000287588.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  NW957_RS08165 (NW957_08165) htrA 1712952..1714226 (+) 1275 WP_165468770.1 trypsin-like peptidase domain-containing protein Regulator
  NW957_RS08170 (NW957_08170) tyrS 1714320..1715582 (-) 1263 WP_000186029.1 tyrosine--tRNA ligase -
  NW957_RS08175 (NW957_08175) - 1715964..1716869 (+) 906 WP_000184370.1 transglycosylase domain-containing protein -
  NW957_RS08180 (NW957_08180) - 1716849..1716941 (-) 93 WP_031761401.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45872.09 Da        Isoelectric Point: 10.0361

>NTDB_id=620798 NW957_RS08165 WP_165468770.1 1712952..1714226(+) (htrA) [Staphylococcus aureus strain 27-G-H]
MSDFNHTDHSTTNHRQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDREDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=620798 NW957_RS08165 WP_165468770.1 1712952..1714226(+) (htrA) [Staphylococcus aureus strain 27-G-H]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGGCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATTATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTTCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCTGGAGTAGGTTCAGGTGTTATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTTGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGCGAACGTACGATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTTAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCTATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGAGAAGACGGTATTTATGTCGCCAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

39.055

94.811

0.37