Detailed information NTG0618200

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: NVS73_RS15050
• Genome accession: NZ_CP102769
• Coordinates: 2835760..2836365 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain YZSR384
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2830760..2841365

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NVS73_RS15020 (NVS73_15025)	-	2831573..2831962 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
NVS73_RS15025 (NVS73_15030)	yajC	2832019..2832285 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
NVS73_RS15030 (NVS73_15035)	tgt	2832322..2833467 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
NVS73_RS15035 (NVS73_15040)	queA	2833494..2834522 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
NVS73_RS15040 (NVS73_15045)	yrzS	2834552..2834752 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
NVS73_RS15045 (NVS73_15050)	ruvB	2834745..2835749 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
NVS73_RS15050 (NVS73_15055)	ruvA	2835760..2836365 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
NVS73_RS15055 (NVS73_15060)	bofC	2836504..2837016 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
NVS73_RS15060 (NVS73_15065)	csbX	2837064..2838371 (-)	1308	WP_003246197.1	MFS transporter	-
NVS73_RS15065 (NVS73_15070)	iolG	2838442..2839467 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
NVS73_RS15070 (NVS73_15075)	yrzF	2839705..2840352 (+)	648	WP_003246159.1	phosphotransferase	-
NVS73_RS15075 (NVS73_15080)	-	2840398..2840520 (-)	123	WP_003229707.1	hypothetical protein	-
NVS73_RS15080 (NVS73_15085)	yrzH	2840605..2840895 (+)	291	WP_003246047.1	DUF5412 family protein	-
NVS73_RS15085 (NVS73_15090)	-	2840902..2841042 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=618200 NVS73_RS15050 WP_003229717.1 2835760..2836365(-) (ruvA) [Bacillus subtilis strain YZSR384]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=618200 NVS73_RS15050 WP_003229717.1 2835760..2836365(-) (ruvA) [Bacillus subtilis strain YZSR384]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408