Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   SAIN_RS03455 Genome accession   NC_022244
Coordinates   707107..708111 (+) Length   334 a.a.
NCBI ID   WP_021001527.1    Uniprot ID   -
Organism   Streptococcus anginosus C1051     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 702107..713111
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAIN_RS09800 - 702936..703808 (+) 873 WP_051148113.1 hypothetical protein -
  SAIN_RS09805 - 703871..704326 (+) 456 WP_051148114.1 hypothetical protein -
  SAIN_RS09810 - 704335..705390 (+) 1056 WP_106079246.1 LTA synthase family protein -
  SAIN_RS03450 (SAIN_0674) - 705760..706842 (-) 1083 WP_003025164.1 M24 family metallopeptidase -
  SAIN_RS03455 (SAIN_0675) ccpA 707107..708111 (+) 1005 WP_021001527.1 catabolite control protein A Regulator
  SAIN_RS03460 (SAIN_0676) - 708291..709289 (+) 999 WP_021001528.1 glycosyltransferase family 4 protein -
  SAIN_RS03465 (SAIN_0677) - 709291..710604 (+) 1314 WP_021001529.1 glycosyltransferase family 4 protein -
  SAIN_RS03470 (SAIN_0678) - 710631..710972 (+) 342 WP_021001530.1 hypothetical protein -
  SAIN_RS03475 (SAIN_0679) micA 711262..711963 (+) 702 WP_021001531.1 response regulator YycF Regulator

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36975.08 Da        Isoelectric Point: 5.5322

>NTDB_id=61761 SAIN_RS03455 WP_021001527.1 707107..708111(+) (ccpA) [Streptococcus anginosus C1051]
MNTDDTVTIYDVAREAGISMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITSSYFA
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATMDAVECLTKNNQKIAFVSGPLVDDINGKIRLAGYKEALKKAKLTYSEGLVFESKYSYDDGYQLAERVIASK
ATAAFVTGDELAAGLLNGLSDKGVNIPEDFEIITSDDSQVARFTRPNLTTIGQPLYDLGAISMRMLTKIMHKEELEEREV
VLAHGLIERRSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=61761 SAIN_RS03455 WP_021001527.1 707107..708111(+) (ccpA) [Streptococcus anginosus C1051]
ATGAACACAGACGATACAGTAACCATTTATGATGTCGCGCGTGAAGCGGGAATTTCGATGGCAACCGTTAGCCGTGTGGT
AAATGGAAACAAAAATGTAAAAGAAAATACAAGAAAAAAAGTCTTGGAAGTGATTGACCGCTTGGATTACCGACCAAATG
CGGTAGCGCGTGGCTTAGCTAGCAAAAAGACGACAACTGTCGGGGTTGTCATTCCAAATATCACAAGCAGTTATTTTGCA
ACGCTTGCAAAAGGAATTGATGATATCGCAGAGATGTACAAATATAATATTGTCTTAGCCAATAGTGATGAAGATGATGA
CAAAGAAGTTTCTGTTGTCAATACGCTGTTCTCAAAACAAGTAGATGGTATCATTTTTATGGGCTATCATTTAACAGAAA
AGATTCGCTCCGAGTTTTCTCGTTCGCGGACGCCAGTTGTGCTTGCAGGCACAGTTGATGTGGAGCATCAATTACCAAGT
GTGAATATTGACTATAAGCAAGCAACCATGGATGCAGTTGAATGTCTTACGAAAAATAATCAAAAAATTGCTTTTGTAAG
CGGACCTTTGGTGGATGATATCAATGGTAAGATTCGTTTAGCTGGTTACAAAGAAGCTTTGAAGAAAGCTAAACTTACCT
ATAGTGAAGGATTGGTTTTTGAGTCAAAATACAGCTATGATGATGGTTATCAATTAGCAGAACGGGTCATTGCTTCTAAA
GCTACAGCAGCCTTTGTGACTGGTGATGAACTGGCAGCTGGATTGTTAAATGGATTATCAGACAAAGGTGTAAATATACC
AGAAGATTTTGAAATCATTACTAGTGATGATTCGCAGGTAGCACGTTTTACCCGTCCAAATTTGACGACTATTGGTCAGC
CTTTGTATGACCTCGGTGCGATTAGTATGCGCATGTTGACTAAGATTATGCACAAGGAAGAGCTAGAAGAACGCGAAGTG
GTATTAGCTCATGGTCTTATTGAGCGCCGTTCAACAAGAAAGTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

90.12

100

0.901
  ccpA Streptococcus pneumoniae D39

88.024

100

0.88
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.402

99.102

0.569

Multiple sequence alignment