Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | SAIN_RS01010 | Genome accession | NC_022244 |
| Coordinates | 196825..197778 (+) | Length | 317 a.a. |
| NCBI ID | WP_021001235.1 | Uniprot ID | A0AAP6BRI6 |
| Organism | Streptococcus anginosus C1051 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 191825..202778
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAIN_RS00970 (SAIN_0192) | - | 192718..193083 (+) | 366 | WP_003027003.1 | DUF1033 family protein | - |
| SAIN_RS00975 (SAIN_0193) | comYA | 193153..194094 (+) | 942 | WP_003027001.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SAIN_RS00980 (SAIN_0194) | comYB | 194036..195058 (+) | 1023 | WP_041783985.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SAIN_RS00985 (SAIN_0195) | comYC | 195055..195372 (+) | 318 | WP_003028473.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SAIN_RS00990 (SAIN_0196) | comYD | 195332..195760 (+) | 429 | WP_021001232.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SAIN_RS00995 (SAIN_0197) | comGE/cglE | 195732..196025 (+) | 294 | WP_021001233.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SAIN_RS01000 | comGF/cglF | 196009..196446 (+) | 438 | WP_041783987.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SAIN_RS01005 (SAIN_0198) | comGG | 196427..196753 (+) | 327 | WP_021001234.1 | competence type IV pilus minor pilin ComGG | - |
| SAIN_RS01010 (SAIN_0199) | comYH | 196825..197778 (+) | 954 | WP_021001235.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SAIN_RS01015 (SAIN_0200) | - | 197825..199024 (+) | 1200 | WP_021001236.1 | acetate kinase | - |
| SAIN_RS01020 (SAIN_0201) | glmS | 199376..201190 (+) | 1815 | WP_003026983.1 | glutamine--fructose-6-phosphate transaminase (isomerizing) | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36049.93 Da Isoelectric Point: 4.3472
>NTDB_id=61737 SAIN_RS01010 WP_021001235.1 196825..197778(+) (comYH) [Streptococcus anginosus C1051]
MNFEKIEQAYTLLLENVQEIQNDLLTSFYDALIEQNGSYLDGDIELDSVRQNNEKLKALKLSKEEWRRAYQFLLMKAAQT
EPLQANHQFTPDSIGFILTFLIDQLSKKEHIDILEIGSGMGNLAETILNNTKKNVDYLGLELDDLLIDISASIADVMDAK
VSFVQGDAVRPQVLKESDVIISDLPVGFYPDDNIAMRYEVASRQEHTYAHHLLMEQSLKYLKSDGYAIFLAPNDLLTSSQ
SDLLKKWLQKHAQIVAMIALPESLFGNAAYAKTIFVLKKQDEQAIQPFVYALSDLQNQADLLTFSEKFQNWSQESEI
MNFEKIEQAYTLLLENVQEIQNDLLTSFYDALIEQNGSYLDGDIELDSVRQNNEKLKALKLSKEEWRRAYQFLLMKAAQT
EPLQANHQFTPDSIGFILTFLIDQLSKKEHIDILEIGSGMGNLAETILNNTKKNVDYLGLELDDLLIDISASIADVMDAK
VSFVQGDAVRPQVLKESDVIISDLPVGFYPDDNIAMRYEVASRQEHTYAHHLLMEQSLKYLKSDGYAIFLAPNDLLTSSQ
SDLLKKWLQKHAQIVAMIALPESLFGNAAYAKTIFVLKKQDEQAIQPFVYALSDLQNQADLLTFSEKFQNWSQESEI
Nucleotide
Download Length: 954 bp
>NTDB_id=61737 SAIN_RS01010 WP_021001235.1 196825..197778(+) (comYH) [Streptococcus anginosus C1051]
ATGAATTTTGAAAAAATTGAACAGGCTTATACGCTCTTGTTAGAAAATGTCCAAGAAATCCAAAATGATCTTTTAACGAG
CTTTTATGATGCTTTGATAGAGCAAAATGGCAGCTATTTGGACGGGGATATCGAACTAGATAGTGTTCGGCAGAACAATG
AAAAACTGAAAGCGTTGAAATTAAGTAAAGAAGAATGGCGTCGAGCCTACCAATTTTTGCTGATGAAAGCAGCTCAAACA
GAGCCTTTGCAAGCCAATCATCAATTTACTCCAGATTCTATCGGGTTTATCTTAACTTTTCTCATTGACCAATTGAGTAA
AAAAGAACACATTGATATTTTGGAAATTGGTAGCGGAATGGGGAATTTAGCAGAGACCATTCTCAATAATACAAAGAAAA
ATGTGGATTATCTAGGACTGGAATTGGACGATCTGCTAATTGATATATCAGCCAGTATCGCAGATGTGATGGATGCAAAA
GTTAGTTTTGTGCAAGGTGATGCAGTGCGTCCGCAAGTATTGAAAGAAAGCGATGTGATTATCAGTGATTTACCAGTTGG
CTTTTATCCTGATGATAACATTGCGATGCGCTATGAAGTGGCTAGTAGACAGGAGCATACTTATGCTCATCATTTGTTAA
TGGAACAATCGCTCAAGTATCTCAAATCGGATGGTTATGCTATTTTCCTTGCACCGAATGATTTATTGACTAGTTCGCAA
AGTGATTTATTGAAGAAATGGCTACAAAAGCATGCACAAATAGTTGCAATGATTGCGTTACCAGAGTCTCTTTTTGGAAA
TGCAGCATACGCTAAAACAATTTTTGTACTGAAAAAGCAAGATGAACAAGCTATCCAACCATTTGTTTATGCTTTATCTG
ATTTGCAGAATCAAGCGGATTTATTGACATTTAGCGAAAAGTTTCAAAATTGGAGCCAAGAAAGTGAAATTTAA
ATGAATTTTGAAAAAATTGAACAGGCTTATACGCTCTTGTTAGAAAATGTCCAAGAAATCCAAAATGATCTTTTAACGAG
CTTTTATGATGCTTTGATAGAGCAAAATGGCAGCTATTTGGACGGGGATATCGAACTAGATAGTGTTCGGCAGAACAATG
AAAAACTGAAAGCGTTGAAATTAAGTAAAGAAGAATGGCGTCGAGCCTACCAATTTTTGCTGATGAAAGCAGCTCAAACA
GAGCCTTTGCAAGCCAATCATCAATTTACTCCAGATTCTATCGGGTTTATCTTAACTTTTCTCATTGACCAATTGAGTAA
AAAAGAACACATTGATATTTTGGAAATTGGTAGCGGAATGGGGAATTTAGCAGAGACCATTCTCAATAATACAAAGAAAA
ATGTGGATTATCTAGGACTGGAATTGGACGATCTGCTAATTGATATATCAGCCAGTATCGCAGATGTGATGGATGCAAAA
GTTAGTTTTGTGCAAGGTGATGCAGTGCGTCCGCAAGTATTGAAAGAAAGCGATGTGATTATCAGTGATTTACCAGTTGG
CTTTTATCCTGATGATAACATTGCGATGCGCTATGAAGTGGCTAGTAGACAGGAGCATACTTATGCTCATCATTTGTTAA
TGGAACAATCGCTCAAGTATCTCAAATCGGATGGTTATGCTATTTTCCTTGCACCGAATGATTTATTGACTAGTTCGCAA
AGTGATTTATTGAAGAAATGGCTACAAAAGCATGCACAAATAGTTGCAATGATTGCGTTACCAGAGTCTCTTTTTGGAAA
TGCAGCATACGCTAAAACAATTTTTGTACTGAAAAAGCAAGATGAACAAGCTATCCAACCATTTGTTTATGCTTTATCTG
ATTTGCAGAATCAAGCGGATTTATTGACATTTAGCGAAAAGTTTCAAAATTGGAGCCAAGAAAGTGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
61.905 |
99.369 |
0.615 |
| comYH | Streptococcus mutans UA159 |
61.587 |
99.369 |
0.612 |