Detailed information NTG0617309

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: LIS75_RS17090
• Genome accession: NZ_CP085388
• Coordinates: 3436656..3437819 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CMF18
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3431656..3442819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIS75_RS17060 (LIS75_17070)	-	3431921..3432340 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
LIS75_RS17065 (LIS75_17075)	comFC	3432414..3433103 (-)	690	WP_196758106.1	phosphoribosyltransferase family protein	Machinery gene
LIS75_RS17070 (LIS75_17080)	-	3433109..3433393 (-)	285	WP_022553866.1	competence protein ComFB	-
LIS75_RS17075 (LIS75_17085)	comFA	3433451..3434836 (-)	1386	WP_243662307.1	DEAD/DEAH box helicase	Machinery gene
LIS75_RS17080 (LIS75_17090)	-	3434944..3435792 (-)	849	WP_024085866.1	DegV family protein	-
LIS75_RS17085 (LIS75_17095)	degU	3435890..3436579 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
LIS75_RS17090 (LIS75_17100)	degS	3436656..3437819 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
LIS75_RS17095 (LIS75_17105)	-	3438042..3438689 (+)	648	WP_252206629.1	YigZ family protein	-
LIS75_RS17100 (LIS75_17110)	-	3438694..3439908 (+)	1215	WP_003151383.1	LCP family protein	-
LIS75_RS17105 (LIS75_17115)	-	3439998..3441074 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
LIS75_RS17110 (LIS75_17120)	-	3441207..3442403 (-)	1197	WP_044052856.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=617309 LIS75_RS17090 WP_003151385.1 3436656..3437819(-) (degS) [Bacillus velezensis strain CMF18]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=617309 LIS75_RS17090 WP_003151385.1 3436656..3437819(-) (degS) [Bacillus velezensis strain CMF18]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948