Detailed information NTG0616910

Bioinformatically predicted

Overview

• Name: comQ
• Type: Regulator
• Locus tag: LJA36_RS14130
• Genome accession: NZ_CP085282
• Coordinates: 2970834..2971820 (+)
• Length: 328 a.a.
• NCBI ID: WP_269195024.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain TPS17
• Function: modification of ComX; production of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 2965834..2976820

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LJA36_RS14100	-	2965869..2966267 (+)	399	WP_003152031.1	DUF1694 domain-containing protein	-
LJA36_RS14105	-	2966364..2966915 (+)	552	WP_003152033.1	isochorismatase family cysteine hydrolase	-
LJA36_RS14110	-	2966933..2968399 (+)	1467	WP_015418109.1	nicotinate phosphoribosyltransferase	-
LJA36_RS14115	-	2968529..2969752 (+)	1224	WP_007408678.1	EAL and HDOD domain-containing protein	-
LJA36_RS14120	-	2969759..2970100 (-)	342	WP_015418107.1	hypothetical protein	-
LJA36_RS14125	degQ	2970563..2970703 (+)	141	WP_003152043.1	degradation enzyme regulation protein DegQ	Regulator
LJA36_RS14130	comQ	2970834..2971820 (+)	987	WP_269195024.1	class 1 isoprenoid biosynthesis enzyme	Regulator
LJA36_RS14135	comX	2971783..2971953 (+)	171	WP_003152048.1	competence pheromone ComX	Regulator
LJA36_RS14140	comP	2971973..2974276 (+)	2304	WP_040238945.1	histidine kinase	Regulator
LJA36_RS14145	comA	2974357..2975001 (+)	645	WP_003152052.1	response regulator transcription factor	Regulator
LJA36_RS14150	-	2975023..2975406 (+)	384	WP_040238946.1	hotdog fold thioesterase	-
LJA36_RS14155	mnhG	2975446..2975820 (-)	375	WP_003152056.1	monovalent cation/H(+) antiporter subunit G	-
LJA36_RS14160	-	2975804..2976088 (-)	285	WP_012118311.1	Na(+)/H(+) antiporter subunit F1	-
LJA36_RS14165	-	2976088..2976564 (-)	477	WP_007613428.1	Na+/H+ antiporter subunit E	-

Sequence

Protein

• Length: 328 a.a.
• Molecular weight: 37726.29 Da
• Isoelectric Point: 5.4671

>NTDB_id=616910 LJA36_RS14130 WP_269195024.1 2970834..2971820(+) (comQ) [Bacillus amyloliquefaciens strain TPS17]
MKTIIEQICLDANQIKNRMKSIIERNIFNEHLMQLLLSFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLT
SDIIDDLEDEDNRDAPWMKIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPKTEDECLE
VIKLKCGSLFALANVTGTLLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQEL
LCIFSDQKLYSQLRLNKKEFIQKLYDSGASQYVSVLYQLYMHKCETEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEF
NKLFFELS

Nucleotide

• Length: 987 bp

>NTDB_id=616910 LJA36_RS14130 WP_269195024.1 2970834..2971820(+) (comQ) [Bacillus amyloliquefaciens strain TPS17]
GTGAAGACAATTATTGAGCAAATATGTTTAGATGCCAACCAAATCAAGAATAGAATGAAGAGTATAATAGAGCGGAACAT
ATTTAATGAACATCTAATGCAGCTCCTTCTCAGTTTTATTGAACCAAAAAAAAATTTTTCTCTAGCTGAATCAGCTGTTT
TGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTGCCGCTATTGAAATTCTTACACTTACT
TCCGATATAATTGATGATCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATGAAGATAGATCGTTCACTAGCATTAAG
TGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTACGAATCCTTTAGTGATTAAGTATGTAT
TAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAACCAAAGACAGAAGATGAATGTTTAGAG
GTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACGCTTTTAGCAACTGGAGAATTCAATAA
ATCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGCGATTATCATGCTATTTTTAAGGATAATA
CTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCTTGTTTAATAAGTCTTCTCAAGAATTG
CTTTGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAAGAGTTTATCCAAAAGCTGTATGATTC
TGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGAAACTGAAGTTGAAAATTTAAATTTAG
ATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATAAGAAGGATGATGAAGATGCAGAATTT
AATAAATTATTTTTTGAATTATCCTGA

Domains

Predicted by InterproScan.

• Polyprenyl synthetase (polyprenyl_synt) (59-232)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comQ	Bacillus subtilis subsp. subtilis str. 168	61.938	88.11	0.546