Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   SANR_RS01675 Genome accession   NC_022239
Coordinates   314092..315138 (+) Length   348 a.a.
NCBI ID   WP_003033732.1    Uniprot ID   I0SKG6
Organism   Streptococcus anginosus C238     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 309092..320138
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SANR_RS01645 (SANR_0320) tsaE 310465..310905 (+) 441 WP_003033807.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SANR_RS01650 (SANR_0321) - 310898..311419 (+) 522 WP_003033811.1 GNAT family N-acetyltransferase -
  SANR_RS01655 (SANR_0322) brpA 311426..312541 (+) 1116 WP_020999464.1 biofilm formation/cell division transcriptional regulator BrpA -
  SANR_RS01660 (SANR_0323) - 312588..312875 (-) 288 WP_003033778.1 hypothetical protein -
  SANR_RS01665 (SANR_0324) - 312885..313295 (-) 411 WP_003025977.1 HIT family protein -
  SANR_RS01670 (SANR_0325) pptA 313364..314095 (+) 732 WP_003033712.1 ABC transporter ATP-binding protein Regulator
  SANR_RS01675 (SANR_0326) pptB 314092..315138 (+) 1047 WP_003033732.1 ABC transporter permease Regulator
  SANR_RS01680 (SANR_0327) ccrZ 315189..315986 (+) 798 WP_020999465.1 cell cycle regulator CcrZ -
  SANR_RS01685 (SANR_0328) trmB 315983..316618 (+) 636 WP_003033795.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SANR_RS01690 (SANR_0329) - 317384..318073 (+) 690 WP_020999466.1 VIT family protein -
  SANR_RS01695 (SANR_0330) rimP 318321..318809 (+) 489 WP_003033786.1 ribosome maturation factor RimP -
  SANR_RS01700 (SANR_0331) nusA 318857..320050 (+) 1194 WP_020999467.1 transcription termination factor NusA -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 41034.45 Da        Isoelectric Point: 10.5296

>NTDB_id=61651 SANR_RS01675 WP_003033732.1 314092..315138(+) (pptB) [Streptococcus anginosus C238]
MRNLFQKRRQVFRNQCLKYSRYVFNDHFVLFLLVFIGFLAVQYSQLLRNFPKNRLPIILALVVLLFLLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQEQTRLSYRLWALLQTVVLLLLVPLFLALGMPLWGWFILVFLMLIAKWFVFLQKSQKFYQGAG
VNWSYLIAYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNIYLRSYLRNGDFLALTIRLLFLS
LLGIGFISQSWIAAIFVALLNYLLLFQLTALYNAFDYQYLTFLFPLETGLKLKGVKQVIILIGYSVLFVETMMALLFFQD
RVALLFMIGITLLLYVIYLPFKLRSLVD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=61651 SANR_RS01675 WP_003033732.1 314092..315138(+) (pptB) [Streptococcus anginosus C238]
ATGAGAAATCTGTTTCAAAAGCGCAGGCAAGTATTTCGCAATCAATGTTTGAAGTATTCACGCTATGTTTTTAATGACCA
TTTTGTCCTCTTTTTATTGGTCTTTATTGGCTTTTTAGCTGTTCAATACAGTCAACTGTTACGAAATTTTCCTAAAAATC
GCCTGCCAATCATTCTTGCTTTAGTGGTTCTTTTGTTCTTATTATTGCCTTTGGGACGAATTGCGACTTATATGGAAAAA
CCAGATAGTTTATTTTTGTTAGTCAAAGAGGAGGAATTAAAAAGCTACCTACAAGAACAAACGCGTTTATCTTATCGATT
ATGGGCCTTGCTTCAAACCGTTGTGTTGTTACTATTAGTACCGCTTTTTCTTGCCTTAGGCATGCCGCTTTGGGGCTGGT
TTATTCTTGTTTTTCTTATGTTGATAGCAAAATGGTTCGTATTTTTGCAGAAAAGTCAAAAATTTTACCAGGGTGCAGGG
GTGAATTGGAGCTATCTCATTGCTTATGAAGAAAGACGTAAGCAGACAATCCTACGTTTCTTTGCTCTCTTTACCAATGT
CAAAGGAATTTCTAATAGTGTGAAACGCCGTGCGTATCTTGATGGTTTGACAAATATTCTACCAAAAAGACAGTCAACTA
CTTGGCAAAATATATATTTGCGTTCTTATTTACGCAATGGTGATTTTCTGGCCTTGACTATACGGTTGCTGTTTCTGTCT
CTTTTGGGAATTGGTTTTATCAGTCAATCATGGATTGCGGCTATTTTCGTGGCTTTGTTGAATTATCTCTTGCTATTTCA
GTTGACAGCCTTGTACAATGCTTTTGATTATCAATATTTGACGTTCTTATTTCCTTTGGAAACTGGATTGAAATTAAAAG
GAGTGAAACAAGTGATTATTCTTATTGGCTACAGCGTGCTTTTTGTGGAAACAATGATGGCTTTGCTGTTTTTCCAAGAT
AGAGTAGCTTTGCTTTTTATGATAGGAATCACATTGCTACTCTATGTCATTTATTTACCATTCAAATTAAGAAGTTTGGT
TGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I0SKG6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.276

100

0.483

  pptB Streptococcus salivarius strain HSISS4

47.414

100

0.474


Multiple sequence alignment