Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SANR_RS01670 Genome accession   NC_022239
Coordinates   313364..314095 (+) Length   243 a.a.
NCBI ID   WP_003033712.1    Uniprot ID   F9P436
Organism   Streptococcus anginosus C238     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 308364..319095
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SANR_RS01640 (SANR_0319) - 308783..310222 (+) 1440 WP_003033775.1 NCS2 family permease -
  SANR_RS01645 (SANR_0320) tsaE 310465..310905 (+) 441 WP_003033807.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SANR_RS01650 (SANR_0321) - 310898..311419 (+) 522 WP_003033811.1 GNAT family N-acetyltransferase -
  SANR_RS01655 (SANR_0322) brpA 311426..312541 (+) 1116 WP_020999464.1 biofilm formation/cell division transcriptional regulator BrpA -
  SANR_RS01660 (SANR_0323) - 312588..312875 (-) 288 WP_003033778.1 hypothetical protein -
  SANR_RS01665 (SANR_0324) - 312885..313295 (-) 411 WP_003025977.1 HIT family protein -
  SANR_RS01670 (SANR_0325) pptA 313364..314095 (+) 732 WP_003033712.1 ABC transporter ATP-binding protein Regulator
  SANR_RS01675 (SANR_0326) pptB 314092..315138 (+) 1047 WP_003033732.1 ABC transporter permease Regulator
  SANR_RS01680 (SANR_0327) ccrZ 315189..315986 (+) 798 WP_020999465.1 cell cycle regulator CcrZ -
  SANR_RS01685 (SANR_0328) trmB 315983..316618 (+) 636 WP_003033795.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SANR_RS01690 (SANR_0329) - 317384..318073 (+) 690 WP_020999466.1 VIT family protein -
  SANR_RS01695 (SANR_0330) rimP 318321..318809 (+) 489 WP_003033786.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26860.46 Da        Isoelectric Point: 4.7336

>NTDB_id=61650 SANR_RS01670 WP_003033712.1 313364..314095(+) (pptA) [Streptococcus anginosus C238]
MLEIKGLTGGYVNIPVLKDISFTVGNGELVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDSPTAYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDVEQKVAFARVEKLLTMFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLEDEKAKGKSILMSTHVLDSAEKMCDSFVILHKGEIRAKGNLAELRAEFAMPEASLNDIYLVLTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=61650 SANR_RS01670 WP_003033712.1 313364..314095(+) (pptA) [Streptococcus anginosus C238]
ATGTTAGAAATAAAAGGGCTTACAGGGGGCTATGTGAATATCCCTGTTTTAAAAGACATCAGTTTCACAGTAGGAAATGG
GGAACTGGTGGGGTTGATTGGTTTGAATGGTGCGGGTAAATCCACTACAATCAATGAAATTATCGGACTTTTAACTCCTT
ATAAAGGTGAAATTTTAATTGACGGTGCCAAACTGCAAGACAGTCCTACGGCTTATCGTAAGAAAATTGGTTTTATTCCG
GAAACACCTAGTTTGTATGAGGAATTAACGCTGCGCGAGCATATTGAAACGGTTGCTATGGCTTATGATGTGGAGCAAAA
GGTGGCTTTTGCGCGCGTGGAGAAATTATTGACGATGTTTCGCTTGAAAGAAAAATTAGATTGGTTTCCGGTGCATTTTT
CTAAAGGAATGAAGCAAAAAGTCATGATTATCTGTGCATTTGTGGTTGACCCCAGCCTTTTTATCGTTGATGAACCATTT
TTAGGACTTGATCCAGTTGCCATTGCTGACTTGATAGAGCTTTTGGAGGATGAAAAGGCAAAAGGCAAGTCAATTCTTAT
GAGTACGCATGTGCTGGATTCGGCAGAAAAGATGTGTGATTCATTCGTGATATTGCATAAGGGAGAAATCCGAGCTAAAG
GCAATTTAGCAGAATTACGAGCAGAATTTGCCATGCCAGAAGCTAGTCTCAATGACATTTATCTAGTTTTGACAGAAGAG
GCGAGCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9P436

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

72.803

98.354

0.716
  pptA Streptococcus salivarius strain HSISS4

72.385

98.354

0.712

Multiple sequence alignment