Detailed information
Bioinformatically predicted
Overview
| Name | ruvA | Type | Machinery gene |
| Locus tag | NQZ88_RS00365 | Genome accession | NZ_CP102152 |
| Coordinates | 63802..64392 (+) | Length | 196 a.a. |
| NCBI ID | WP_011921679.1 | Uniprot ID | A0A0H3N1H3 |
| Organism | Streptococcus suis strain DNS11 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 58802..69392
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NQZ88_RS00355 (NQZ88_00355) | - | 60185..61708 (+) | 1524 | WP_024405860.1 | quinol oxidase | - |
| NQZ88_RS00360 (NQZ88_00360) | hexB | 61826..63763 (+) | 1938 | WP_012774891.1 | DNA mismatch repair endonuclease MutL | Machinery gene |
| NQZ88_RS00365 (NQZ88_00365) | ruvA | 63802..64392 (+) | 591 | WP_011921679.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| NQZ88_RS00370 (NQZ88_00370) | - | 65117..65686 (+) | 570 | WP_012774893.1 | DNA-3-methyladenine glycosylase I | - |
| NQZ88_RS00375 (NQZ88_00375) | cinA | 65723..66904 (+) | 1182 | WP_023369043.1 | competence/damage-inducible protein A | Machinery gene |
| NQZ88_RS00380 (NQZ88_00380) | recA | 66956..68104 (+) | 1149 | WP_023369045.1 | recombinase RecA | Machinery gene |
| NQZ88_RS00385 (NQZ88_00385) | spx | 68340..68738 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| NQZ88_RS00390 (NQZ88_00390) | - | 68838..69104 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21739.10 Da Isoelectric Point: 5.0800
>NTDB_id=615633 NQZ88_RS00365 WP_011921679.1 63802..64392(+) (ruvA) [Streptococcus suis strain DNS11]
MYDYIKGILTKITAKYIVVETQGVGYILQVANPYAYSGQVQQEVTVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGI
GPTTALAIIAVDDNDGLVRAIEQKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGPVQQVAPSSENIALEEAMEAME
ALGYRPAELKKIKKFFEGTNDTAENYIKSALKMLMK
MYDYIKGILTKITAKYIVVETQGVGYILQVANPYAYSGQVQQEVTVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGI
GPTTALAIIAVDDNDGLVRAIEQKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGPVQQVAPSSENIALEEAMEAME
ALGYRPAELKKIKKFFEGTNDTAENYIKSALKMLMK
Nucleotide
Download Length: 591 bp
>NTDB_id=615633 NQZ88_RS00365 WP_011921679.1 63802..64392(+) (ruvA) [Streptococcus suis strain DNS11]
ATGTACGACTATATTAAAGGAATTTTAACAAAAATAACTGCAAAATACATTGTGGTAGAAACGCAAGGAGTAGGCTATAT
CTTGCAGGTTGCTAATCCCTACGCCTATTCAGGACAAGTCCAGCAAGAAGTGACTGTCTATACTCATCAGGTGATTCGTG
AAGATGCTCATTTGCTCTACGGATTTGCTACAGAAAATGAAAAATCCGTCTTTCTGAGTCTGATTTCAGTATCAGGTATT
GGTCCAACAACAGCTCTGGCTATTATTGCTGTTGATGATAATGATGGACTTGTTCGTGCTATCGAGCAGAAAAACATTAC
CTACCTGACCAAATTTCCAAAGATTGGCAAGAAAACAGCCCAGCAGATGATTTTGGACTTGGAAGGCAAGTTTGTCATGA
GCGAAGAAGCGGGTCCTGTTCAACAAGTAGCACCATCCAGTGAAAATATCGCCCTTGAAGAAGCCATGGAAGCCATGGAA
GCCCTTGGTTACCGCCCAGCCGAACTCAAGAAAATCAAGAAATTCTTTGAAGGTACCAACGACACCGCAGAAAACTACAT
CAAGTCAGCCCTTAAAATGCTGATGAAGTAA
ATGTACGACTATATTAAAGGAATTTTAACAAAAATAACTGCAAAATACATTGTGGTAGAAACGCAAGGAGTAGGCTATAT
CTTGCAGGTTGCTAATCCCTACGCCTATTCAGGACAAGTCCAGCAAGAAGTGACTGTCTATACTCATCAGGTGATTCGTG
AAGATGCTCATTTGCTCTACGGATTTGCTACAGAAAATGAAAAATCCGTCTTTCTGAGTCTGATTTCAGTATCAGGTATT
GGTCCAACAACAGCTCTGGCTATTATTGCTGTTGATGATAATGATGGACTTGTTCGTGCTATCGAGCAGAAAAACATTAC
CTACCTGACCAAATTTCCAAAGATTGGCAAGAAAACAGCCCAGCAGATGATTTTGGACTTGGAAGGCAAGTTTGTCATGA
GCGAAGAAGCGGGTCCTGTTCAACAAGTAGCACCATCCAGTGAAAATATCGCCCTTGAAGAAGCCATGGAAGCCATGGAA
GCCCTTGGTTACCGCCCAGCCGAACTCAAGAAAATCAAGAAATTCTTTGAAGGTACCAACGACACCGCAGAAAACTACAT
CAAGTCAGCCCTTAAAATGCTGATGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvA | Streptococcus pneumoniae R6 |
76.142 |
100 |
0.765 |
| ruvA | Streptococcus pneumoniae D39 |
76.142 |
100 |
0.765 |
| ruvA | Streptococcus pneumoniae TIGR4 |
76.142 |
100 |
0.765 |
| ruvA | Bacillus subtilis subsp. subtilis str. 168 |
39.409 |
100 |
0.408 |