Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | LIO34_RS00430 | Genome accession | NZ_CP085085 |
| Coordinates | 73898..74164 (+) | Length | 88 a.a. |
| NCBI ID | WP_002939335.1 | Uniprot ID | A0A126UJ45 |
| Organism | Streptococcus suis strain Ssuis_MA8 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 68898..79164
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LIO34_RS00400 | recA | 70087..71238 (+) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
| LIO34_RS00405 | spx | 71474..71872 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| LIO34_RS00410 | - | 71972..72238 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| LIO34_RS00415 | ruvX | 72238..72657 (+) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| LIO34_RS00420 | - | 72669..72989 (+) | 321 | WP_002939343.1 | DUF1292 domain-containing protein | - |
| LIO34_RS00425 | - | 73247..73825 (+) | 579 | WP_044667815.1 | nucleotidyltransferase family protein | - |
| LIO34_RS00430 | comX/sigX | 73898..74164 (+) | 267 | WP_002939335.1 | hypothetical protein | Regulator |
| LIO34_RS00435 | rpsJ | 74486..74794 (+) | 309 | WP_013730061.1 | 30S ribosomal protein S10 | - |
| LIO34_RS00440 | rplC | 75007..75633 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| LIO34_RS00445 | rplD | 75658..76281 (+) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| LIO34_RS00450 | - | 76281..76580 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| LIO34_RS00455 | rplB | 76598..77431 (+) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| LIO34_RS00460 | rpsS | 77533..77814 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| LIO34_RS00465 | rplV | 77832..78176 (+) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| LIO34_RS00470 | rpsC | 78189..78842 (+) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10717.52 Da Isoelectric Point: 9.1949
>NTDB_id=615145 LIO34_RS00430 WP_002939335.1 73898..74164(+) (comX/sigX) [Streptococcus suis strain Ssuis_MA8]
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=615145 LIO34_RS00430 WP_002939335.1 73898..74164(+) (comX/sigX) [Streptococcus suis strain Ssuis_MA8]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
73.973 |
82.955 |
0.614 |
| comX/sigX | Streptococcus suis isolate S10 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis P1/7 |
72.603 |
82.955 |
0.602 |
| comX/sigX/comX1/sigX1 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |
| comX/sigX/comX2/sigX2 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |