Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LF296_RS15055 Genome accession   NZ_CP085083
Coordinates   3216546..3216929 (-) Length   127 a.a.
NCBI ID   WP_004652356.1    Uniprot ID   A0A2N0WJ47
Organism   Acinetobacter vivianii strain KJ-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3211546..3221929
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LF296_RS15040 (LF296_15040) - 3213453..3215534 (-) 2082 WP_123775885.1 methyl-accepting chemotaxis protein -
  LF296_RS15045 (LF296_15045) - 3215582..3216118 (-) 537 WP_004775363.1 chemotaxis protein CheW -
  LF296_RS15050 (LF296_15050) - 3216163..3216525 (-) 363 WP_004775365.1 response regulator -
  LF296_RS15055 (LF296_15055) pilG 3216546..3216929 (-) 384 WP_004652356.1 twitching motility response regulator PilG Regulator
  LF296_RS15060 (LF296_15060) - 3217208..3217852 (+) 645 WP_069578855.1 hypothetical protein -
  LF296_RS15065 (LF296_15065) - 3218068..3219783 (+) 1716 WP_272654831.1 proline--tRNA ligase -
  LF296_RS15070 (LF296_15070) - 3219840..3220175 (-) 336 WP_004775368.1 YegP family protein -
  LF296_RS15075 (LF296_15075) - 3220331..3220675 (-) 345 WP_004775370.1 zinc ribbon domain-containing protein YjdM -
  LF296_RS15080 (LF296_15080) - 3220728..3221084 (-) 357 WP_272654832.1 DUF488 domain-containing protein -
  LF296_RS15085 (LF296_15085) - 3221109..3221447 (-) 339 WP_272654833.1 DUF2004 domain-containing protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14226.35 Da        Isoelectric Point: 4.7278

>NTDB_id=615123 LF296_RS15055 WP_004652356.1 3216546..3216929(-) (pilG) [Acinetobacter vivianii strain KJ-1]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=615123 LF296_RS15055 WP_004652356.1 3216546..3216929(-) (pilG) [Acinetobacter vivianii strain KJ-1]
ATGGAAGATAAATTTCAAAATTTAAAGGTGATGGTGATTGACGATTCTAAAACGATTCGTCGTACAGCTGAAACGTTATT
GCAACGTGAAGGCTGTGAAGTCATTACTGCGGTTGATGGCTTTGAAGCATTATCAAAAATTGCAGAAGCTAATCCGGATA
TCGTTTTTGTTGACATCATGATGCCTCGTTTAGACGGATACCAAACCTGCGCATTAATTAAAAACTCTCTAAATTATCAA
AATATTCCAGTCATTATGTTGTCAAGCAAAGACGGTTTGTTTGATCAGGCGAAAGGCCGTGTCGTGGGTTCTGATGAGTA
TTTAACCAAGCCATTCAGTAAAGATGAGTTGTTAAACGCGATTCGCAACCACGTTAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2N0WJ47

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

97.638

100

0.976
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37