Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   LG319_RS04515 Genome accession   NZ_CP085027
Coordinates   906028..907074 (+) Length   348 a.a.
NCBI ID   WP_053025471.1    Uniprot ID   -
Organism   Staphylococcus haemolyticus strain SLM-175     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 901028..912074
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG319_RS04485 (LG319_04460) map 901905..902657 (+) 753 WP_053025476.1 type I methionyl aminopeptidase -
  LG319_RS04490 (LG319_04465) - 902909..903058 (-) 150 WP_245151289.1 hypothetical protein -
  LG319_RS04495 (LG319_04470) - 903191..903628 (-) 438 Protein_882 SDR family NAD(P)-dependent oxidoreductase -
  LG319_RS04500 (LG319_04475) - 903700..904593 (-) 894 Protein_883 HoxN/HupN/NixA family nickel/cobalt transporter -
  LG319_RS04505 (LG319_04480) - 904919..905305 (+) 387 WP_053025474.1 hypothetical protein -
  LG319_RS04510 (LG319_04485) liaF 905330..906031 (+) 702 WP_053025472.1 cell wall-active antibiotics response protein LiaF -
  LG319_RS04515 (LG319_04490) vraS 906028..907074 (+) 1047 WP_053025471.1 sensor histidine kinase Regulator
  LG319_RS04520 (LG319_04495) vraR 907064..907693 (+) 630 WP_053025469.1 two-component system response regulator VraR Regulator
  LG319_RS04525 (LG319_04500) - 907756..908967 (-) 1212 WP_053025467.1 YihY/virulence factor BrkB family protein -
  LG319_RS04530 (LG319_04505) - 909166..909450 (-) 285 WP_053025464.1 YtxH domain-containing protein -
  LG319_RS04535 (LG319_04510) - 909456..909920 (-) 465 WP_053025462.1 low molecular weight protein-tyrosine-phosphatase -
  LG319_RS04540 (LG319_04515) - 910062..910271 (+) 210 WP_011275380.1 DUF1128 domain-containing protein -
  LG319_RS04545 (LG319_04520) - 910285..911532 (+) 1248 WP_053025460.1 aminopeptidase -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40180.57 Da        Isoelectric Point: 5.8508

>NTDB_id=614717 LG319_RS04515 WP_053025471.1 906028..907074(+) (vraS) [Staphylococcus haemolyticus strain SLM-175]
MNHYLRAIGSMLILVYSMLTAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLVIILLCIIVGSILAYKINQQNQWIKS
QIEHAIEGETVGINDQNIELYNETIDLYQTLVPLNQELHRLRMKTQNLTNENYNMNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEAPLDQQIPVLEKMVQESQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVIHDI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNQQDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNREDDNNDD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=614717 LG319_RS04515 WP_053025471.1 906028..907074(+) (vraS) [Staphylococcus haemolyticus strain SLM-175]
ATGAACCACTACTTAAGAGCTATCGGTTCAATGCTTATACTAGTTTATAGCATGTTAACCGCGTTCTTATTTATAGATAA
AGTATTTGTTAATATTATCTACTTCCAAGGTATGTTTTATACTCAAATTTTTGGGATACCTGTTTTTCTATTTTTAAATT
TAGTCATCATTTTACTTTGTATTATTGTAGGTTCAATTCTCGCATATAAAATTAATCAACAAAATCAGTGGATTAAGTCA
CAAATTGAACATGCCATTGAAGGAGAAACAGTAGGTATTAATGATCAAAATATTGAGCTTTATAACGAAACCATAGACCT
TTATCAAACATTAGTTCCGCTAAATCAAGAGTTGCACCGTTTACGAATGAAAACGCAAAACTTAACTAATGAAAATTACA
ATATGAATGATGTCAAAGTTAAGAAAATCATTGAGGATGAACGACAGAGATTAGCTCGCGAGTTACACGACTCTGTAAGT
CAACAACTTTTTGCAGCAAGTATGATGTTATCTGCAATAAAAGAAACAAAGTTAGAGGCACCGCTTGATCAACAAATACC
AGTTTTAGAGAAAATGGTTCAGGAGTCTCAACTTGAAATGCGCGCATTATTACTTCATTTAAGACCTTTAGGTCTAAAAG
ATAAATCACTAGGTGAAGGTATCAAAGATTTAGTTATTGATTTGCAAAAGAAAGTGCCTATGAAAGTCATACACGATATT
CAAGATTTCAAGGTGCCTAAAGGTATAGAAGATCATTTATTTAGAATTACACAAGAGGCTATATCAAATACGTTAAGACA
TTCAAATGGAACTAAAGTCACAGTGGAATTATTTAACCAACAAGATTATCTATTACTTCGAATTCAAGACAATGGTAAAG
GATTCAATGTTGACGAGAAATTAGAGCAAAGTTATGGATTAAAAAATATGAGAGAACGCGCATTAGAAATTGGTGCGACA
TTCCATATTGTATCGTTACCGGATTCTGGAACGAGAATAGAAGTTAAAGCACCGTTAAATAGGGAGGATGATAATAATGA
CGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

91.931

99.713

0.917