Detailed information
Bioinformatically predicted
Overview
| Name | ruvA | Type | Machinery gene |
| Locus tag | NQZ84_RS00375 | Genome accession | NZ_CP102094 |
| Coordinates | 66106..66696 (+) | Length | 196 a.a. |
| NCBI ID | WP_011921679.1 | Uniprot ID | A0A0H3N1H3 |
| Organism | Streptococcus suis strain 12RC1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 61106..71696
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NQZ84_RS00365 (NQZ84_00365) | - | 62489..64012 (+) | 1524 | WP_044769565.1 | quinol oxidase | - |
| NQZ84_RS00370 (NQZ84_00370) | hexB | 64130..66067 (+) | 1938 | WP_172058503.1 | DNA mismatch repair endonuclease MutL | Machinery gene |
| NQZ84_RS00375 (NQZ84_00375) | ruvA | 66106..66696 (+) | 591 | WP_011921679.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| NQZ84_RS00380 (NQZ84_00380) | - | 66949..67509 (+) | 561 | WP_044683393.1 | DNA-3-methyladenine glycosylase I | - |
| NQZ84_RS00385 (NQZ84_00385) | - | 67583..67993 (+) | 411 | WP_044683392.1 | helix-turn-helix transcriptional regulator | - |
| NQZ84_RS00390 (NQZ84_00390) | - | 67966..68631 (+) | 666 | WP_044683391.1 | CPBP family intramembrane glutamic endopeptidase | - |
| NQZ84_RS00395 (NQZ84_00395) | cinA | 68776..69957 (+) | 1182 | WP_044683390.1 | competence/damage-inducible protein A | Machinery gene |
| NQZ84_RS00400 (NQZ84_00400) | recA | 70009..71160 (+) | 1152 | WP_044668625.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21739.10 Da Isoelectric Point: 5.0800
>NTDB_id=614652 NQZ84_RS00375 WP_011921679.1 66106..66696(+) (ruvA) [Streptococcus suis strain 12RC1]
MYDYIKGILTKITAKYIVVETQGVGYILQVANPYAYSGQVQQEVTVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGI
GPTTALAIIAVDDNDGLVRAIEQKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGPVQQVAPSSENIALEEAMEAME
ALGYRPAELKKIKKFFEGTNDTAENYIKSALKMLMK
MYDYIKGILTKITAKYIVVETQGVGYILQVANPYAYSGQVQQEVTVYTHQVIREDAHLLYGFATENEKSVFLSLISVSGI
GPTTALAIIAVDDNDGLVRAIEQKNITYLTKFPKIGKKTAQQMILDLEGKFVMSEEAGPVQQVAPSSENIALEEAMEAME
ALGYRPAELKKIKKFFEGTNDTAENYIKSALKMLMK
Nucleotide
Download Length: 591 bp
>NTDB_id=614652 NQZ84_RS00375 WP_011921679.1 66106..66696(+) (ruvA) [Streptococcus suis strain 12RC1]
ATGTACGACTATATTAAAGGAATTTTAACAAAAATAACTGCAAAATACATTGTGGTAGAAACGCAAGGAGTAGGCTATAT
CTTGCAGGTTGCTAATCCCTACGCCTATTCAGGACAAGTCCAGCAAGAAGTGACTGTCTATACTCATCAAGTGATTCGAG
AAGATGCTCATTTGCTCTACGGATTTGCTACAGAAAATGAAAAATCCGTCTTTCTGAGTCTGATTTCAGTATCAGGTATT
GGTCCAACAACGGCTCTGGCTATTATTGCTGTTGATGATAATGATGGACTTGTTCGTGCTATTGAGCAGAAAAACATTAC
CTACCTGACCAAGTTTCCGAAGATTGGCAAGAAAACAGCCCAGCAGATGATTTTGGACTTGGAAGGCAAGTTTGTCATGA
GCGAAGAAGCGGGTCCTGTTCAACAAGTAGCACCATCCAGTGAAAATATCGCCCTCGAAGAAGCCATGGAAGCCATGGAA
GCCCTTGGTTACCGCCCAGCCGAACTCAAGAAAATCAAGAAATTCTTTGAAGGCACCAACGACACCGCAGAAAACTACAT
CAAGTCAGCCCTTAAAATGCTGATGAAGTAA
ATGTACGACTATATTAAAGGAATTTTAACAAAAATAACTGCAAAATACATTGTGGTAGAAACGCAAGGAGTAGGCTATAT
CTTGCAGGTTGCTAATCCCTACGCCTATTCAGGACAAGTCCAGCAAGAAGTGACTGTCTATACTCATCAAGTGATTCGAG
AAGATGCTCATTTGCTCTACGGATTTGCTACAGAAAATGAAAAATCCGTCTTTCTGAGTCTGATTTCAGTATCAGGTATT
GGTCCAACAACGGCTCTGGCTATTATTGCTGTTGATGATAATGATGGACTTGTTCGTGCTATTGAGCAGAAAAACATTAC
CTACCTGACCAAGTTTCCGAAGATTGGCAAGAAAACAGCCCAGCAGATGATTTTGGACTTGGAAGGCAAGTTTGTCATGA
GCGAAGAAGCGGGTCCTGTTCAACAAGTAGCACCATCCAGTGAAAATATCGCCCTCGAAGAAGCCATGGAAGCCATGGAA
GCCCTTGGTTACCGCCCAGCCGAACTCAAGAAAATCAAGAAATTCTTTGAAGGCACCAACGACACCGCAGAAAACTACAT
CAAGTCAGCCCTTAAAATGCTGATGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvA | Streptococcus pneumoniae R6 |
76.142 |
100 |
0.765 |
| ruvA | Streptococcus pneumoniae D39 |
76.142 |
100 |
0.765 |
| ruvA | Streptococcus pneumoniae TIGR4 |
76.142 |
100 |
0.765 |
| ruvA | Bacillus subtilis subsp. subtilis str. 168 |
39.409 |
100 |
0.408 |