Detailed information NTG0614259

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: NQD67_RS01100
• Genome accession: NZ_CP101994
• Coordinates: 189651..190112 (+)
• Length: 153 a.a.
• NCBI ID: WP_001874060.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain BCJB3343
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 184651..195112

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQD67_RS01075 (NQD67_01075)	-	186555..186920 (+)	366	WP_000285373.1	DUF1033 family protein	-
NQD67_RS01080 (NQD67_01080)	comGA	187093..188064 (+)	972	WP_000250808.1	competence type IV pilus ATPase ComGA	Machinery gene
NQD67_RS01085 (NQD67_01085)	comGB	187958..189001 (+)	1044	WP_223295592.1	competence type IV pilus assembly protein ComGB	Machinery gene
NQD67_RS01090 (NQD67_01090)	comGD	188998..189426 (+)	429	WP_000793381.1	competence type IV pilus minor pilin ComGD	Machinery gene
NQD67_RS01095 (NQD67_01095)	comGE	189398..189697 (+)	300	WP_001867089.1	competence type IV pilus minor pilin ComGE	Machinery gene
NQD67_RS01100 (NQD67_01100)	comGF	189651..190112 (+)	462	WP_001874060.1	competence type IV pilus minor pilin ComGF	Machinery gene
NQD67_RS01105 (NQD67_01105)	comGG	190090..190461 (+)	372	WP_000601104.1	competence type IV pilus minor pilin ComGG	Machinery gene
NQD67_RS01110 (NQD67_01110)	comGH	190576..191550 (+)	975	WP_001008570.1	class I SAM-dependent methyltransferase	Machinery gene
NQD67_RS01115 (NQD67_01115)	-	191582..192775 (+)	1194	WP_000047535.1	acetate kinase	-
NQD67_RS01120 (NQD67_01120)	-	192926..193132 (+)	207	WP_000798242.1	helix-turn-helix transcriptional regulator	-
NQD67_RS01125 (NQD67_01125)	-	193191..193328 (+)	138	WP_001867090.1	hypothetical protein	-
NQD67_RS01130 (NQD67_01130)	-	193369..193824 (+)	456	WP_000905674.1	hypothetical protein	-
NQD67_RS01135 (NQD67_01135)	-	193893..194558 (+)	666	WP_000008111.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17861.86 Da
• Isoelectric Point: 9.8392

>NTDB_id=614259 NQD67_RS01100 WP_001874060.1 189651..190112(+) (comGF) [Streptococcus agalactiae strain BCJB3343]
MKVIRKFCTYQKLRVKAFTLLECLVALVTITGALLVYQGLTKLLAQQIVVMSSSSQSEWVLLTQQLNAEFEGAHLEYLRQ
NKLYLRKQDKIVTFGKSNKDDFRKTGYDGRGYQPMVYGLDNCQMSQTKSMVKLVFYFKDGLKRTFYYDFKEET

Nucleotide

• Length: 462 bp

>NTDB_id=614259 NQD67_RS01100 WP_001874060.1 189651..190112(+) (comGF) [Streptococcus agalactiae strain BCJB3343]
TTGAAGGTAATAAGGAAATTTTGCACGTATCAAAAGTTAAGGGTTAAAGCATTTACGCTTTTAGAATGTTTGGTAGCATT
GGTTACAATCACAGGAGCTTTACTAGTTTATCAAGGACTGACAAAATTGTTGGCTCAACAGATAGTAGTGATGTCTTCTT
CCAGTCAGTCTGAATGGGTGTTATTAACTCAGCAACTAAATGCAGAATTCGAAGGCGCTCACTTGGAATATTTAAGACAG
AACAAACTTTATTTACGTAAGCAAGATAAGATTGTAACCTTTGGCAAATCTAATAAAGATGATTTCCGTAAGACAGGTTA
TGATGGTCGAGGTTATCAACCAATGGTTTATGGGTTAGACAATTGTCAAATGAGTCAAACCAAAAGTATGGTAAAACTTG
TTTTTTATTTTAAGGACGGGTTAAAAAGGACATTTTACTATGATTTTAAAGAAGAAACTTAA

Domains

Predicted by InterProScan.

• Putative Competence protein ComGF (ComGF) (49-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Streptococcus mutans UA159	47.887	92.81	0.444
comGF	Streptococcus mutans UA140	47.887	92.81	0.444
comGF/cglF	Streptococcus pneumoniae Rx1	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae D39	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae R6	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae TIGR4	43.165	90.85	0.392
comGF/cglF	Streptococcus mitis SK321	44.03	87.582	0.386
comGF/cglF	Streptococcus mitis NCTC 12261	43.284	87.582	0.379
comGF	Lactococcus lactis subsp. cremoris KW2	40.714	91.503	0.373