Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   LG653_RS16990 Genome accession   NZ_CP084921
Coordinates   3477808..3480240 (-) Length   810 a.a.
NCBI ID   WP_002118905.1    Uniprot ID   A0A009N350
Organism   Acinetobacter pittii strain CEP14     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3472808..3485240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG653_RS16965 (LG653_16965) purM 3473124..3474194 (+) 1071 WP_002118876.1 phosphoribosylformylglycinamidine cyclo-ligase -
  LG653_RS16970 (LG653_16970) purN 3474191..3474820 (+) 630 WP_002118669.1 phosphoribosylglycinamide formyltransferase -
  LG653_RS16975 (LG653_16975) - 3474898..3475698 (-) 801 WP_002118584.1 alpha/beta hydrolase -
  LG653_RS16980 (LG653_16980) sppA 3475722..3476738 (-) 1017 WP_002118954.1 signal peptide peptidase SppA -
  LG653_RS16985 (LG653_16985) - 3476872..3477855 (+) 984 WP_002118440.1 lysophospholipid acyltransferase family protein -
  LG653_RS16990 (LG653_16990) comA/comEC 3477808..3480240 (-) 2433 WP_002118905.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  LG653_RS16995 (LG653_16995) lolD 3480324..3481010 (-) 687 WP_002118798.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  LG653_RS17000 (LG653_17000) lolC 3481003..3482238 (-) 1236 WP_004790618.1 lipoprotein-releasing ABC transporter permease subunit -
  LG653_RS17005 (LG653_17005) - 3482361..3482468 (+) 108 Protein_3311 PilZ domain-containing protein -
  LG653_RS17010 (LG653_17010) - 3482498..3483406 (-) 909 WP_002118971.1 EamA family transporter -
  LG653_RS17015 (LG653_17015) - 3483414..3483902 (-) 489 WP_078210287.1 YaiI/YqxD family protein -
  LG653_RS17020 (LG653_17020) - 3484149..3485090 (+) 942 WP_002118998.1 hypothetical protein -

Sequence


Protein


Download         Length: 810 a.a.        Molecular weight: 92852.37 Da        Isoelectric Point: 8.9137

>NTDB_id=614103 LG653_RS16990 WP_002118905.1 3477808..3480240(-) (comA/comEC) [Acinetobacter pittii strain CEP14]
MLKLILMGWIGGIAFMGIDIPLIMQYGWLGKVLLVMGFIFYIFKRNIFLNRPILKTIYCLVCAISLFTIGHQYAQHALNQ
RLELRQMQPKSLDIIVYVDRISDEKEDKTQQPVQVLGQSLHPVNWLLYLKNQKVNSAIDEPKLKLGHYYRISGKTKPAHS
YAVAGVFDQEQWFIQRNIMSGFSVQHIEPLSSDEIYQLGYQHHLKEQQKFFNRQKLNVEKLRLTFRLMLKQSTLQNKGLL
LALLTGDESLLNDEIKNQFKELGISHLLAISGPHVLIFAIMLSWVLHQLIRRYYPQLYLHQPKQIWTMIPLCFGVLIYTA
FVGFEIPALRTLLSVFLFAFLVLIKVAVKPFSLLVYSASLLLLFDPFSALSAGFWLSYGSCFILLRIYQTIEQAPNLVST
SLLSRIILFSKILIESQGKIFIALCPLMLIFFQQITWVAPFTNIIAVPLLGGVIVPLNIFAACVWLIFNSFGNLLFQISD
VLISIVLSCFNLLEKLSLPLQGFSLTPLDLVCLSFVIIILFLPRGVLPKSWGLICCLPLIIPDKSSLQIQLNIIDVGQGQ
SIFLQHPQQTWLIDTGGSYDEKAFSIGRNVVIPYLRQKGIKQLDHVVLSHLDQDHSGAFPSIAQTFPIKQVISNELWKEQ
ITEPFTYCHQGQKWQYPQLDIEILWPKEKDLNLVSTNQNQYSCVIYIHLKQINDYQNYLIMGDAGLEAEYQLMKEYPDLK
VDVLVLGHHGSKHSSAYDFLATLNPKLVVASAGFNNRYGHPSKEVLARIQELNIPFKSTVEQGTLSFVSRNQEMVLYTRR
FERTWLHRNL

Nucleotide


Download         Length: 2433 bp        

>NTDB_id=614103 LG653_RS16990 WP_002118905.1 3477808..3480240(-) (comA/comEC) [Acinetobacter pittii strain CEP14]
ATGTTAAAACTTATTTTAATGGGGTGGATTGGGGGTATTGCATTTATGGGGATAGATATCCCTTTAATAATGCAATATGG
GTGGTTAGGTAAAGTCTTGCTTGTTATGGGTTTTATTTTTTATATTTTTAAGAGAAATATTTTCTTAAATCGCCCCATAT
TAAAAACCATTTACTGTCTAGTCTGTGCTATTAGTCTCTTTACTATAGGACATCAATATGCTCAGCATGCCTTAAATCAA
AGATTAGAACTGCGACAAATGCAGCCTAAATCTTTAGATATTATTGTGTATGTCGACCGTATAAGTGACGAAAAAGAAGA
TAAGACACAGCAACCCGTTCAGGTATTAGGGCAGTCCTTACATCCCGTTAATTGGCTATTATATTTAAAAAATCAAAAAG
TAAACTCAGCCATAGATGAGCCAAAATTAAAATTAGGTCATTATTATCGAATTTCTGGCAAAACCAAACCTGCTCATAGT
TATGCAGTGGCTGGTGTTTTTGACCAAGAACAGTGGTTCATTCAACGAAATATAATGTCTGGTTTTAGTGTTCAGCATAT
TGAGCCTTTAAGCTCTGATGAAATTTATCAGTTGGGTTATCAACATCATTTAAAAGAGCAACAGAAATTCTTTAACAGAC
AAAAATTAAATGTAGAAAAGTTGCGCCTAACGTTTAGATTAATGTTAAAACAATCTACTTTGCAAAATAAAGGACTGTTA
TTAGCTTTATTAACAGGGGATGAAAGTCTCTTAAATGATGAGATTAAAAATCAATTTAAGGAATTAGGAATCTCTCATCT
GTTAGCCATTTCAGGGCCTCATGTACTCATTTTTGCTATCATGTTGTCTTGGGTATTACATCAATTAATAAGACGTTATT
ATCCGCAGCTTTATTTGCATCAACCTAAACAAATTTGGACCATGATTCCATTATGTTTCGGTGTTTTAATTTATACGGCA
TTTGTTGGTTTTGAAATTCCCGCCTTAAGAACTTTACTCTCAGTATTTTTATTTGCTTTTTTGGTATTGATTAAAGTGGC
TGTTAAACCATTTTCACTCTTGGTTTATAGCGCAAGTCTACTTTTACTTTTCGATCCCTTCAGTGCTTTATCCGCAGGTT
TTTGGCTGTCTTATGGTTCTTGCTTTATTTTATTACGGATTTATCAAACTATAGAGCAGGCTCCAAATCTTGTTTCAACT
AGTCTGTTATCTAGAATCATTCTTTTCAGTAAAATTTTAATTGAATCTCAAGGCAAAATATTTATTGCCTTATGTCCTCT
AATGTTGATTTTCTTTCAACAGATTACATGGGTTGCTCCTTTTACAAATATTATTGCAGTTCCTTTACTCGGAGGAGTGA
TTGTTCCTTTAAATATTTTTGCAGCTTGTGTATGGCTTATTTTTAACTCATTCGGAAATTTACTTTTTCAAATTAGTGAC
GTCCTGATTAGTATAGTACTGTCATGTTTTAATCTTTTAGAAAAGTTATCTCTACCATTACAAGGTTTTAGCCTCACACC
ACTTGATTTAGTGTGCCTTAGCTTCGTTATTATTATCTTATTTTTACCGCGTGGGGTTTTACCCAAATCTTGGGGGCTAA
TATGCTGTTTACCCTTGATCATTCCAGATAAGTCGTCCCTGCAAATTCAATTAAATATTATAGATGTAGGACAGGGGCAA
TCTATATTCTTACAGCACCCGCAGCAGACATGGCTCATCGATACGGGTGGGTCTTATGACGAGAAAGCTTTTAGTATTGG
TCGAAATGTGGTGATTCCATATTTACGCCAAAAGGGAATTAAACAACTGGATCACGTCGTACTATCTCATCTTGATCAAG
ATCATAGCGGAGCATTTCCTTCTATTGCTCAGACTTTTCCTATTAAACAAGTCATATCAAATGAATTATGGAAAGAGCAA
ATTACAGAACCATTTACTTATTGTCATCAAGGGCAAAAATGGCAATATCCACAATTAGATATTGAAATTCTTTGGCCTAA
AGAAAAAGATTTAAACTTAGTTTCTACAAATCAAAATCAATATTCTTGTGTGATTTATATTCATTTAAAACAGATAAATG
ACTATCAAAATTATTTAATCATGGGCGATGCAGGGTTGGAAGCAGAATATCAACTCATGAAAGAATATCCTGATTTAAAG
GTGGATGTCTTGGTATTAGGTCATCATGGAAGTAAACATAGTTCAGCTTACGACTTCTTAGCGACGTTAAACCCCAAGCT
TGTTGTTGCTTCTGCTGGCTTTAATAATCGTTATGGTCATCCAAGCAAAGAGGTTTTAGCGAGAATACAAGAGCTTAATA
TTCCATTTAAAAGCACAGTTGAGCAAGGAACATTGAGTTTTGTATCTCGCAATCAAGAGATGGTTTTATACACTCGACGT
TTCGAGCGTACTTGGCTTCACAGGAATTTGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A009N350

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii D1279779

68.85

99.877

0.688

  comA/comEC Acinetobacter baumannii strain A118

68.232

99.877

0.681

  comA/comEC Acinetobacter baylyi ADP1

48.708

100

0.489