Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | N175_RS02720 | Genome accession | NC_022223 |
| Coordinates | 588621..589214 (+) | Length | 197 a.a. |
| NCBI ID | WP_013855887.1 | Uniprot ID | A0A233HKC5 |
| Organism | Vibrio anguillarum M3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 583621..594214
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N175_RS02705 (N175_02805) | - | 584378..586876 (-) | 2499 | WP_013855884.1 | penicillin-binding protein 1A | - |
| N175_RS02710 (N175_02810) | pilM | 587026..588036 (+) | 1011 | WP_013855885.1 | type IV pilus assembly protein PilM | Machinery gene |
| N175_RS02715 (N175_02815) | pilN | 588026..588628 (+) | 603 | WP_013855886.1 | PilN domain-containing protein | Machinery gene |
| N175_RS02720 (N175_02820) | pilO | 588621..589214 (+) | 594 | WP_013855887.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| N175_RS02725 (N175_02825) | pilP | 589201..589722 (+) | 522 | WP_013855888.1 | pilus assembly protein PilP | Machinery gene |
| N175_RS02730 (N175_02830) | pilQ | 589746..591461 (+) | 1716 | WP_013855889.1 | type IV pilus secretin PilQ | Machinery gene |
| N175_RS02735 (N175_02835) | aroK | 591648..592169 (+) | 522 | WP_010317691.1 | shikimate kinase AroK | - |
| N175_RS02740 (N175_02840) | aroB | 592194..593282 (+) | 1089 | WP_026027894.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 23039.37 Da Isoelectric Point: 4.3879
>NTDB_id=61356 N175_RS02720 WP_013855887.1 588621..589214(+) (pilO) [Vibrio anguillarum M3]
MTSFQDLDMDEMAEWPLLPQLLVILVLMLIIQGVGAWFYLMPQNEQLQNLKQQEEVLKSTLRIKASKAATLPQLQAQLDE
LTERYDFLLRQLPVQKELASMLASVNELGLDNALTFTRIDWGEKQNKEFLYRLPLNIELTGNYHDIGDFSEAIAKLPRII
NFDDVDWQRVSQESSTLHFRVRAYTYQFKQEVDDEKQ
MTSFQDLDMDEMAEWPLLPQLLVILVLMLIIQGVGAWFYLMPQNEQLQNLKQQEEVLKSTLRIKASKAATLPQLQAQLDE
LTERYDFLLRQLPVQKELASMLASVNELGLDNALTFTRIDWGEKQNKEFLYRLPLNIELTGNYHDIGDFSEAIAKLPRII
NFDDVDWQRVSQESSTLHFRVRAYTYQFKQEVDDEKQ
Nucleotide
Download Length: 594 bp
>NTDB_id=61356 N175_RS02720 WP_013855887.1 588621..589214(+) (pilO) [Vibrio anguillarum M3]
ATGACTAGTTTTCAAGATCTTGATATGGATGAAATGGCTGAATGGCCGTTGCTGCCTCAACTGCTGGTTATTTTGGTGTT
GATGCTGATTATTCAAGGCGTTGGCGCGTGGTTCTACCTGATGCCTCAAAATGAGCAATTGCAGAACTTAAAACAGCAAG
AAGAGGTGCTGAAATCGACCTTACGGATTAAGGCCAGCAAAGCCGCCACCTTACCCCAGTTGCAAGCTCAACTGGATGAA
TTAACTGAACGTTATGATTTTTTATTACGCCAATTACCCGTGCAAAAAGAGCTCGCAAGCATGCTCGCATCGGTCAATGA
ACTAGGGCTAGATAACGCGTTAACCTTTACACGTATTGATTGGGGAGAAAAACAGAATAAAGAGTTTCTGTATCGTTTGC
CGCTCAATATCGAATTAACTGGGAATTACCACGACATTGGTGATTTCTCAGAGGCGATCGCGAAATTGCCCCGCATTATT
AATTTCGATGATGTTGATTGGCAACGGGTTAGCCAGGAAAGCAGCACGTTACATTTTAGGGTGCGCGCTTATACCTATCA
ATTCAAGCAAGAGGTGGACGATGAAAAACAATAA
ATGACTAGTTTTCAAGATCTTGATATGGATGAAATGGCTGAATGGCCGTTGCTGCCTCAACTGCTGGTTATTTTGGTGTT
GATGCTGATTATTCAAGGCGTTGGCGCGTGGTTCTACCTGATGCCTCAAAATGAGCAATTGCAGAACTTAAAACAGCAAG
AAGAGGTGCTGAAATCGACCTTACGGATTAAGGCCAGCAAAGCCGCCACCTTACCCCAGTTGCAAGCTCAACTGGATGAA
TTAACTGAACGTTATGATTTTTTATTACGCCAATTACCCGTGCAAAAAGAGCTCGCAAGCATGCTCGCATCGGTCAATGA
ACTAGGGCTAGATAACGCGTTAACCTTTACACGTATTGATTGGGGAGAAAAACAGAATAAAGAGTTTCTGTATCGTTTGC
CGCTCAATATCGAATTAACTGGGAATTACCACGACATTGGTGATTTCTCAGAGGCGATCGCGAAATTGCCCCGCATTATT
AATTTCGATGATGTTGATTGGCAACGGGTTAGCCAGGAAAGCAGCACGTTACATTTTAGGGTGCGCGCTTATACCTATCA
ATTCAAGCAAGAGGTGGACGATGAAAAACAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio cholerae strain A1552 |
80.612 |
99.492 |
0.802 |
| pilO | Vibrio campbellii strain DS40M4 |
70.37 |
95.939 |
0.675 |