Detailed information NTG0613368

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: NP434_RS13860
• Genome accession: NZ_CP101936
• Coordinates: 2690260..2690865 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. subtilis strain BGSC 10A5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2685260..2695865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NP434_RS13830 (NP434_13830)	-	2686073..2686462 (+)	390	WP_029727131.1	TIGR04086 family membrane protein	-
NP434_RS13835 (NP434_13835)	yajC	2686519..2686785 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
NP434_RS13840 (NP434_13840)	tgt	2686822..2687967 (-)	1146	WP_119899634.1	tRNA guanosine(34) transglycosylase Tgt	-
NP434_RS13845 (NP434_13845)	queA	2687994..2689022 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
NP434_RS13850 (NP434_13850)	yrzS	2689052..2689252 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
NP434_RS13855 (NP434_13855)	ruvB	2689245..2690249 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
NP434_RS13860 (NP434_13860)	ruvA	2690260..2690865 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
NP434_RS13865 (NP434_13865)	bofC	2691004..2691516 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
NP434_RS13870 (NP434_13870)	csbX	2691564..2692871 (-)	1308	WP_003246197.1	MFS transporter	-
NP434_RS13875 (NP434_13875)	iolG	2692942..2693967 (-)	1026	WP_256682916.1	inositol 2-dehydrogenase	-
NP434_RS13880 (NP434_13880)	yrzF	2694205..2694852 (+)	648	WP_003246159.1	phosphotransferase	-
NP434_RS13885 (NP434_13885)	-	2694898..2695020 (-)	123	WP_003229707.1	hypothetical protein	-
NP434_RS13895 (NP434_13895)	-	2695183..2695551 (+)	369	WP_256683497.1	DUF5412 family protein	-
NP434_RS13900 (NP434_13900)	-	2695558..2695698 (+)	141	WP_029727127.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=613368 NP434_RS13860 WP_003229717.1 2690260..2690865(-) (ruvA) [Bacillus subtilis subsp. subtilis strain BGSC 10A5]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=613368 NP434_RS13860 WP_003229717.1 2690260..2690865(-) (ruvA) [Bacillus subtilis subsp. subtilis strain BGSC 10A5]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408