Detailed information NTG0611430

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: LE197_RS03715
• Genome accession: NZ_CP084484
• Coordinates: 772248..774473 (+)
• Length: 741 a.a.
• NCBI ID: WP_114232315.1
• Uniprot ID: -
• Organism: Pseudomonas sp. PS1(2021)
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 767248..779473

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LE197_RS03690 (LE197_03690)	-	767554..768153 (-)	600	WP_196752268.1	PilZ domain-containing protein	-
LE197_RS03695 (LE197_03695)	-	768256..769506 (+)	1251	WP_226033859.1	lipoprotein-releasing ABC transporter permease subunit	-
LE197_RS03700 (LE197_03700)	lolD	769499..770182 (+)	684	WP_003091168.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
LE197_RS03705 (LE197_03705)	-	770252..771496 (+)	1245	WP_033975958.1	lipoprotein-releasing ABC transporter permease subunit	-
LE197_RS03710 (LE197_03710)	-	771584..772117 (-)	534	WP_003091165.1	DUF2062 domain-containing protein	-
LE197_RS03715 (LE197_03715)	comA	772248..774473 (+)	2226	WP_114232315.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LE197_RS03720 (LE197_03720)	exbB	774546..775181 (+)	636	WP_003091163.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
LE197_RS03725 (LE197_03725)	-	775178..775618 (+)	441	WP_003091161.1	ExbD/TolR family protein	-
LE197_RS03730 (LE197_03730)	lpxK	775618..776616 (+)	999	WP_003091159.1	tetraacyldisaccharide 4'-kinase	-
LE197_RS03735 (LE197_03735)	-	776654..776839 (+)	186	WP_003091157.1	Trm112 family protein	-
LE197_RS03740 (LE197_03740)	kdsB	776839..777603 (+)	765	WP_033968892.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
LE197_RS03745 (LE197_03745)	-	777603..778067 (+)	465	WP_033968891.1	low molecular weight protein-tyrosine-phosphatase	-
LE197_RS03750 (LE197_03750)	murB	778064..779083 (+)	1020	WP_033968886.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 79926.61 Da
• Isoelectric Point: 10.3506

>NTDB_id=611430 LE197_RS03715 WP_114232315.1 772248..774473(+) (comA) [Pseudomonas sp. PS1(2021)]
MRLGLPALAAGLLALRFLVELPSLGWLLGMAAAGLLLLFGRLYWLGLFLLGFAWACGSAQVALDGRLAAELDGRTLWLEG
RVVDLPASGEGITRFRLEEVSGARGVLLPERLRLSWRGAPPLMGGERWRLAVTLKRPRGLVNAAGFDYEAWLLGQRVGAV
GMVKAGQRLQPASGLDAWRDAWRQRLLAVDAQGRGAALAALVLGDGSGLSAAEWRMFQDTGTVHLMVISGSHISLLAGML
YGLVAALHRLGCWPRRLPWLPCACALGLLGAWSYGLMAGFEVPVRRACLMVSLALVWRLRFRHLGLLTPLLGTLVLVLLV
EPLASLQAGFWLSFLAVALLLWLFAGRLGRWRWWAAWGRAQWGMALGLAMPLLALGLPLSLSGALANLLAVPWIELLVVP
PALAGSLLLWVPGLGEGLLRAAGVSLDLLFRALGLLAGLAEAWQPPAAAAWSVALGMLGALCWLAPAGLPLRALGAALLL
PALLPSSPPVEWGRAEVRVLDVGQGLAVLVRTREHALLYDSGARQGALDMGERVVVPVLRSLDLRRLDGLLLSHADSDHA
GGAPTVASRFPPGWLVSGEPARLPSPLFADSCDERSWSWDGVVFEQWAWAQAGDSNDRSCVLRVEADGEVLLLTGDMSRA
AEHAWLARQADPRVDWLLAPHHGSRSSSGVAFVLRTRPRHVLVSRGWRNAFGHPHGEVMERYARVAAQVHDTARDGALTF
LLGSRGGARRERDSAHFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=611430 LE197_RS03715 WP_114232315.1 772248..774473(+) (comA) [Pseudomonas sp. PS1(2021)]
ATGCGCCTGGGATTGCCAGCCCTCGCCGCGGGGCTGCTGGCCCTGCGCTTCCTGGTGGAATTGCCGTCGCTCGGCTGGCT
GCTGGGCATGGCCGCCGCCGGACTGTTGCTGCTGTTCGGCCGGCTGTACTGGCTGGGGTTGTTCCTGCTCGGGTTCGCCT
GGGCCTGCGGCTCGGCGCAAGTCGCCCTGGACGGACGCCTGGCCGCCGAGCTGGATGGTCGCACCCTTTGGCTGGAGGGG
CGTGTGGTCGATCTGCCGGCGAGCGGCGAGGGCATCACGCGCTTCCGGCTGGAGGAGGTCAGTGGCGCGCGGGGCGTCCT
TCTTCCCGAGCGTCTGCGCCTGAGCTGGCGTGGTGCGCCGCCGCTGATGGGCGGCGAACGCTGGCGCCTGGCGGTGACCC
TGAAACGCCCTCGCGGCCTGGTGAACGCGGCGGGTTTCGACTACGAAGCCTGGTTGTTGGGGCAGCGGGTCGGTGCCGTT
GGAATGGTGAAGGCGGGCCAGCGCCTGCAGCCGGCCAGTGGCCTGGATGCCTGGCGCGACGCCTGGCGCCAGCGCCTCCT
GGCGGTCGACGCGCAGGGGCGCGGCGCCGCCCTGGCGGCGCTGGTGCTGGGGGATGGCTCTGGATTGAGCGCGGCCGAGT
GGCGCATGTTCCAGGACACCGGCACCGTGCATCTGATGGTCATCTCCGGTTCGCATATCTCGTTGCTGGCGGGGATGCTC
TATGGCCTGGTGGCGGCCTTGCATCGCCTGGGCTGCTGGCCGCGGCGCCTGCCCTGGCTGCCCTGTGCCTGCGCCCTGGG
TTTGCTTGGTGCCTGGAGCTACGGGTTGATGGCGGGTTTCGAGGTCCCGGTGCGGCGTGCCTGCCTGATGGTCAGCCTGG
CGCTGGTCTGGCGCCTGCGTTTCCGCCACCTGGGCTTGCTGACCCCGCTGCTGGGAACGCTGGTGCTGGTCTTGCTGGTC
GAGCCGCTGGCCAGCCTGCAGGCGGGGTTCTGGCTGTCGTTCCTGGCGGTTGCCCTGCTGCTCTGGCTGTTCGCCGGGCG
CCTTGGGCGCTGGCGCTGGTGGGCGGCCTGGGGGCGTGCGCAGTGGGGGATGGCGCTGGGGCTGGCGATGCCGCTGCTGG
CGCTGGGCCTGCCGTTGAGCCTGAGCGGAGCGCTGGCCAACCTGCTGGCGGTACCTTGGATCGAACTGCTGGTAGTGCCC
CCGGCCCTGGCGGGGAGCCTGCTGCTGTGGGTACCCGGGCTGGGCGAGGGGCTGCTTCGCGCCGCTGGCGTTTCGCTGGA
CCTGCTGTTTCGTGCGCTTGGCCTGCTGGCGGGCCTGGCCGAGGCCTGGCAGCCACCCGCCGCAGCGGCCTGGAGCGTAG
CGCTGGGCATGCTCGGCGCGCTCTGCTGGCTGGCGCCGGCTGGCTTGCCGTTGCGTGCCCTCGGTGCCGCGTTGTTACTG
CCGGCGTTGTTGCCGTCATCGCCGCCTGTCGAATGGGGGCGGGCGGAAGTGCGGGTGCTGGACGTCGGCCAGGGGCTGGC
CGTGCTGGTGCGTACCCGGGAGCATGCCTTGCTCTATGACAGCGGTGCGCGGCAGGGGGCATTAGACATGGGCGAGCGGG
TGGTGGTGCCGGTGCTGCGTAGCCTGGACTTGCGACGCCTGGACGGCCTGTTGCTGAGCCATGCCGACAGCGACCATGCA
GGCGGTGCTCCTACGGTCGCTTCCCGATTCCCGCCGGGTTGGCTGGTCAGCGGCGAACCCGCGCGCCTGCCTTCGCCGTT
GTTCGCGGACAGCTGCGACGAGCGGAGCTGGTCCTGGGATGGCGTGGTTTTCGAACAGTGGGCATGGGCGCAGGCCGGCG
ACAGCAACGACCGCTCCTGCGTGCTGAGGGTCGAGGCCGATGGCGAAGTCCTGCTGCTGACCGGGGACATGTCGCGTGCG
GCCGAGCATGCCTGGCTGGCGCGACAGGCCGATCCGCGGGTCGACTGGTTGCTGGCGCCGCACCACGGCAGCCGCAGCTC
CTCCGGAGTCGCCTTCGTGTTGCGTACGCGGCCTCGCCATGTGCTGGTCTCGCGAGGTTGGCGTAACGCCTTCGGCCATC
CCCATGGCGAAGTGATGGAGCGTTACGCGAGGGTCGCCGCGCAGGTCCACGACACGGCACGCGACGGTGCCCTGACGTTT
CTCCTCGGAAGCCGTGGCGGTGCACGCCGGGAGCGTGATTCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (201-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-666)

• Domain of unknown function (DUF4131) (DUF4131) (21-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	58.669	97.301	0.571
comA	Ralstonia pseudosolanacearum GMI1000	35.611	100	0.366